Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2540 ATGGATACTGCTGCCGGTCAGAGTCTCTATCCATTGCACCGTTGCAAAACTGTTCACCTGGTTAGGCATGCCCAAGGAGTTCATAATGTAGCAGGAGAGAAGAACCATGATGCATACAtgtcttatgatttttttgatGCACACCTAACCCCTCTCGGCTGGGAGCAGGTTGATAATCTGCGAAAGCACGTGAAGGCATGTGGACTTTTCAGAAATGTCGAACTTGTTGTCATTTCCCCATTGTTAAGGACCATGCAAACAGCAGCTGGAGTCTTTGGTGGTGAAGCATACACCGATGGGATTAGCGAACCACCTCTAATGATGGAAAATGTTGGACACAGTGATCATCTTGCAGTTTCTAGTCTGAACCGCCCTCCATTTATAGCAGTGGAGCTTTGCCGAGAGCAAATAGGAGTTCATCCTTGTGATAAGAGAAGAACCATCAGTGAGTACCGGAATATGTTTCCAGCAATTGATTTTTCACTGATTGAAAGTGACGAGGACATTTTGTGGAAATCTGACGTCAGAGAGAAGACAGAAGATGTTTCTGCTAGGGGCCTGAAGTTTTTGGAATGGTTATGGACGCGTAAAGAGAAGGAGATAGCAGTTGTTACCCACAGCAGTTTTCTGTTCAATACCCTCCGTGCTTTTGGAAAAGATTGCCACCCAAATATAAAGAGTGAAATATGCACACAcTTTGCTAATTGTGAGCTGCGTTCAGTCGTTACCATTGATAGAGGTATGATTGGATCAAGTGAATCAACTACCAACTATCCTGGCAAGATTCCTAGTGGCCCTGATCCTCCCAGTGATGCTGCTGACTAA 825 0.4388 MDTAAGQSLYPLHRCKTVHLVRHAQGVHNVAGEKNHDAYMSYDFFDAHLTPLGWEQVDNLRKHVKACGLFRNVELVVISPLLRTMQTAAGVFGGEAYTDGISEPPLMMENVGHSDHLAVSSLNRPPFIAVELCREQIGVHPCDKRRTISEYRNMFPAIDFSLIESDEDILWKSDVREKTEDVSARGLKFLEWLWTRKEKEIAVVTHSSFLFNTLRAFGKDCHPNIKSEICTHFANCELRSVVTIDRGMIGSSESTTNYPGKIPSGPDPPSDAAD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2540 274 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 1 274 - -
Ssu6g2540 274 Gene3D - 16 256 IPR029033 -
Ssu6g2540 274 SMART PGAM_5 17 213 IPR013078 -
Ssu6g2540 274 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 1 274 - -
Ssu6g2540 274 SUPERFAMILY Phosphoglycerate mutase-like 16 245 IPR029033 -
Ssu6g2540 274 CDD HP_PGM_like 17 91 IPR013078 -
Ssu6g2540 274 Pfam Histidine phosphatase superfamily (branch 1) 19 91 IPR013078 -
Ssu6g2540 274 MobiDBLite consensus disorder prediction 252 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2540 Ssu-Chr6 59692967 59697438 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2540 - - gmx:100817808 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2540 6 59692967 59697438 Ssu6g2540 6 59692967 59697438 ECH