Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2503 ATGGAAAATTCCGATTCAGCACAGAGCGTACGTGTTGCCGTCAATATTCGGCCTCTGATCACATCGGAGCTTATGCTCGGGTGCACAGATTGCATCTCCGTTGTTCCCGGTGAACCTCAGGTGCAAATTGGGTCGCACGCTTTCACTTATGACTATGTCTATGGTAGTACTGGATCTCCGTTGTCTGCTATATATGATGATTGCGTAGCTCCACTCGTAGATGCGCTTTTCCACGGCTATAATGCAACAGTTCTTGCTTATGGCCAGACTGGATCTGGGAAGACATACACCATGGGCACCAATTACACTGGAGAGGAAAATGCCACTGGAATTATACCCAAGGTAATGGAGACAATATTCAAGAGGGTTCAGACTATGAAGGAATCCTCAGAGTTTTTGATTAGGGTATCTTTTATCGAGATATTCAAGGAAGAGGTATTTGATTTGCTTGATCCCAGTTCATCTAAAGGAGATGTGGCTTCTATTGCGAAGCCTGCTGTGCCCAGCAGAGTTCCCATACAAATTAGAGAAACAGTGAATGGAGGAATAACTCTGGCTGGTGTGACTGAGGCTGAAGTTAAGACTAAAGAAGAAATGTCAACTTATCTTTCTCGAGGTTCACTGTCACGTGCCACTGCGAGTACAAACATGAACAGTCAATCAAGTCGGTCACATGCTATATTCACTATCACAATGGAGCAAAAGAGTGGTGACGATGTCTTGTGTGCAAAACTACATTTGGTGGACCTTGCTGGTTCTGAACGTGCAAAAAGAACTGGTGCAGATGGCATGCGTTTAAAAGAAGGCATTCATATCAACAAGGGTTTATTAGCTCTTGGGAATGTAATAAGTGCACTGGGAGATGAAAGAAAACGAAAAGAAGGTGGCCATGTCCCATATCGTGATAGCAAATTAACAAGGCTACTACAGGATTCCCTTGGAGGAAACAGCAAAACCGTTATGATAGCATGTGTTAGTCCTGCTGACACCAATGCTGAAGAGACATTGAACACTCTGAAGTATGCTAACCGTGCTCGTAACATTCAGAACAAGGCAGTTatTAATCGTGATCCAATGGGAGCTCAGGTGCAGAGAATGCGAAGTCAGATTGAGCAATTGCAGTCTGAGCTTCTATTTTATAGAGGTGATGCTGGTGGGGCATTTGAGGAACTTCAGATTCTTAAACACAAAATATCCTTACTTGAAGCAAGCAATTCAGAGCTACAGCGGGAGCTTCAAGAACGTCGAGTAACCTGTGAGAGTTTCGCACAACGTGCTTGTGATGCTCAGGTTGAAAAGGACAAACTGATCATGAAAATCGAATCAATTCGAAATGGTAAATCTTGGGATGAAATTGACTCAAATTCAAATCAGGATTATGACCTGGTGAAATCTTATGTGTCCAAGATCCAAGATCTGGAAGGCGAATTGCAGCATTTGAAAAAGTCAAATGCGAAATCTAGACATGTTGTTGATTGGGTTGATTCAGATGATAGTGGATTCCAGTCAAAGAATGCCTTATTTGCATGTGGTAATGAGTACTCTTCTGATTGTGATGCCAAATCAGTGGACATAACAGATGACATGGAAGATGATGCAAAGGAGATAGAACACTCTTCTCTTCAAGAAAAGTTGGATAGGGAGCTCAAAGAATTGGATAAGAAACTTGAACAAAAGGAGGCTGAAATGAAGATGTTTAGTAATGCTGATACTCCAGTTCTTAAGCATcattatgaaaagaaaattcttgagttagaacaagagaagaaaatttttcaGAAAGAAATTGAGGAACTTAGATGCAATCTTGCAAATATTTCATCAACCTCTGATGATGGTGCTCAAAAGTTAAAGGAGGAATATCTTCAAAAGTTAAATGCTCTTGAAGCACAGGTCTCTGAGCTGAAGAAGAAACAAGATGCTCAGGCTCAACTGTTGAGACAAAAACAGAGAAGTGACGAGGCTGCAAAACGACTTCAGGATGAGATCCAGAGAATTAAATCTCAAAAGgTTCAATTGCAACATAAGATTAAGCAGGAATCAGAACAATTTAGGTTATGGAAAGCTTCGCGCGAGAAAGAAGTTCTACAGcttaaaaaagaaggaaggagGAACGAATATGAGATGCATAAGCTGTTAGCGTTGAATCAGAGGCAAAAAATGGTTTTGCAAAGGAAGACTGAAGAAGCTTCCTTGGCTACAAAAAGGCTAAAAGAACTTTTGGAATCTCGAAAGACTTCCTCACGCGAAACTACGGGTGCTGCAGGTGGGAATGGTCCAGGAATTCAGGCTTTGATGCAGGCAATTGAGCATGAACTTGAAGTCACAGTCCGAGTGCATGAAGTACGTTCAGCACATGAGCGTCAAATGGAAGAGAGGGCTAAAATGGCTAAGGAGATCACAAGATTAAAGGAAGAAGTAGATATGATGAAGCTAAACAATTCAAGTGATGGCCTCGCATCAATGTCTCCGGGTGCAAGAAATTCAAGGATATTTGCCCTCGAAAAAATGATTGCTACTTCTTCTACAACACTGCTGTCAATGGCATCTCAGTTGTCAGAGGCAGAAGAGCGGGAACGGGTTTTCAGTGGAAAGGGACGTTGGAACCAAGTCCGATCCCTTGCTGAAGCCAAGAATTTGATGAATCATTTGTTCAATCTGGCATCTTCCTCCAGGTGTTTATTGCGAGATAAAGAAGTTATCTGCAGAGAGAAGGACATGGAAATAAGAgatctaaaagaaaaagtagtaaGGTTGAGCTGTTCACTTCGACAGTTGGAAATGCAGAAGTCTGAACTTATTCATCAGTTGAAGTTGCAGAGTGCCAAGAGATACTCAGAATCTGTGGGGTATTCGGTGTATCCTGACATAAATGTTGGAGGACATAAATATGACTTGCGCAAGATGGAAAACCGGCGATCTACAATCTTACTGGAGGATATGGATTTATCAGTATCAGATGCAGAATCAGATGATTATATAGCAGATGCAACTGATGATGAATGGGTAGCGTCAGAAAAAATACATGTTAGGAAAAGAAAGTCTAGAAGCAGACATGTAAGCATGGAAAACAATCAGTCAAATATCAGTTCAGAAGATGTAAAAGATGATTCAACAGAAGAACTTGGAGGTGCATCTGGGGAAACTGCATCAGATATCTGCTGCTCTTGTAGTAAATCTTCGTCCTGCAAGACAAACAAATGCAAGTGCAGAGCTCTGGGCGGCAGTTGTGGGAGTTCTTGTGGTTGCCTAGCATCCAAGTGTGCCAACAGAGCATCAGTCTCAAATGAGTCACAAGTTGAAGGGACTGGTAATGATTCCAGCATTGAGGAAGAAGACAAAGATCGCCTTCTTGCTGCTCAAGGTGCTGAGTTGCTTCAGGGTGCACTGGTTGAGGGGCCTGCTGATGCCCACAGTGATCATGGGCCAAGAAAACCTCTTTCTGATATTGGAAATACACTGGTGCGTGCCAATAAAATCATCTAA 3486 0.4128 MENSDSAQSVRVAVNIRPLITSELMLGCTDCISVVPGEPQVQIGSHAFTYDYVYGSTGSPLSAIYDDCVAPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYTGEENATGIIPKVMETIFKRVQTMKESSEFLIRVSFIEIFKEEVFDLLDPSSSKGDVASIAKPAVPSRVPIQIRETVNGGITLAGVTEAEVKTKEEMSTYLSRGSLSRATASTNMNSQSSRSHAIFTITMEQKSGDDVLCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLALGNVISALGDERKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNKAVINRDPMGAQVQRMRSQIEQLQSELLFYRGDAGGAFEELQILKHKISLLEASNSELQRELQERRVTCESFAQRACDAQVEKDKLIMKIESIRNGKSWDEIDSNSNQDYDLVKSYVSKIQDLEGELQHLKKSNAKSRHVVDWVDSDDSGFQSKNALFACGNEYSSDCDAKSVDITDDMEDDAKEIEHSSLQEKLDRELKELDKKLEQKEAEMKMFSNADTPVLKHHYEKKILELEQEKKIFQKEIEELRCNLANISSTSDDGAQKLKEEYLQKLNALEAQVSELKKKQDAQAQLLRQKQRSDEAAKRLQDEIQRIKSQKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASLATKRLKELLESRKTSSRETTGAAGGNGPGIQALMQAIEHELEVTVRVHEVRSAHERQMEERAKMAKEITRLKEEVDMMKLNNSSDGLASMSPGARNSRIFALEKMIATSSTTLLSMASQLSEAEERERVFSGKGRWNQVRSLAEAKNLMNHLFNLASSSRCLLRDKEVICREKDMEIRDLKEKVVRLSCSLRQLEMQKSELIHQLKLQSAKRYSESVGYSVYPDINVGGHKYDLRKMENRRSTILLEDMDLSVSDAESDDYIADATDDEWVASEKIHVRKRKSRSRHVSMENNQSNISSEDVKDDSTEELGGASGETASDICCSCSKSSSCKTNKCKCRALGGSCGSSCGCLASKCANRASVSNESQVEGTGNDSSIEEEDKDRLLAAQGAELLQGALVEGPADAHSDHGPRKPLSDIGNTLVRANKII 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2503 1161 Coils Coil 391 411 - -
Ssu6g2503 1161 SMART CXC_2 1050 1094 IPR033467 -
Ssu6g2503 1161 Coils Coil 538 569 - -
Ssu6g2503 1161 Coils Coil 363 383 - -
Ssu6g2503 1161 CDD KISc_KIF4 9 349 - -
Ssu6g2503 1161 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 7 1158 - -
Ssu6g2503 1161 Coils Coil 909 943 - -
Ssu6g2503 1161 Coils Coil 575 609 - -
Ssu6g2503 1161 Pfam Kinesin motor domain 41 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2503 1161 Coils Coil 786 813 - -
Ssu6g2503 1161 Coils Coil 723 743 - -
Ssu6g2503 1161 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2503 1161 PRINTS Kinesin heavy chain signature 244 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2503 1161 PRINTS Kinesin heavy chain signature 298 319 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2503 1161 PRINTS Kinesin heavy chain signature 215 232 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2503 1161 SMART kinesin_4 7 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2503 1161 MobiDBLite consensus disorder prediction 1013 1050 - -
Ssu6g2503 1161 ProSitePatterns Kinesin motor domain signature. 243 254 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu6g2503 1161 ProSiteProfiles Kinesin motor domain profile. 9 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2503 1161 Gene3D Kinesin motor domain 4 381 IPR036961 -
Ssu6g2503 1161 Coils Coil 611 683 - -
Ssu6g2503 1161 Coils Coil 463 490 - -
Ssu6g2503 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 381 IPR027417 -
Ssu6g2503 1161 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 7 1158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2503 Ssu-Chr6 59024646 59032139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2503 6 377 Miscellaneous Gene Families AT5G06670 38.021 6.38e-60 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2503 - - gmx:100817984 1991.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2503 6 59024646 59032139 Ssu6g2503 6 59024646 59032139 ECH