Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2495 ATGTCGAGTGGCGGAAACCTTGGTTGCGTGTTGGTGGCGGTTGACGGCAGCGAGGAGAGCATGAAGGCGCTGCGTTGGGCACTCAGCAACCTCAAGCTCCGATCCCCTACACCCGATTCCACGGATGCTCCTTCCTTCATCATCTTCCACGTCCAATCCCCGCCCTCCATCGCCACTGGCCTCAGTCCCGGTTCCATCCCCTTCGGTGGCCCCAGTGACCTCGAAGTTCCTGCCTTCACTGCAGCCATCGAAGCGCACCAGAAGCGCATCACCAACGCCGTTCTCGATCACGCCTTGGGAATTTGCTCCGAGTTCAATCTCACCAGTAAGGTCAGAACCCATGTCGTTGTTGGAGATCCAAAGGAGAAGATTTGTGAAGCTGTGCAGGATTTGCATGCTGATACGCTTGTGATGGGGTCTCGTGCATTTGGCCCCATCAAGAGGATGTTCCTGGGAAGTGTGAGCAACTACTGCGCCCACCATTCTCCGTGTCCCGTGGGTTGCCAGTGCCGCATTTTAGTTGCTGATGCTGCATCCTTGCTTGCCAAATTAATTAGGTCAAAGGTTTTTACGTCTTGGGATTTGCTTGATTTGCTAGACCAGTGTTGTACCTCAGCTTTGAAGCTTATATGTCATTTTGTTGTGCCAATGCTGGCCAGATCCTGCTACAAGTACGTGTTTTCATCACTCTATGTGGACAATACTGCTGTGCGTGTGAAATTCTTGCAGTTAAGAGTGCTTTCCAACTGTGCTGTTTCAACTTCAATTGTTCTCCCAAATGGTTCAAAGAGATATTTGACTCCAGAagCTTCCTTTACCTTGATATCTTCGACCTCAACCCAACAACAAGCCAAACCCGACCCTGTTGCCGTCAACACGGAAACAAACCTCGGAACGCAAAGAAAACTATTAGGGTACGTGCCAGAGGCAAAGAAAGCTGCGTTGCAAAACCTAGAAGACGTGCTTCTAGAACCCCCGCGTGCTGCTTCGGGGAAATCGAGGGTGTACTTGAAGCGTACGAGGTATTTGCCTGATTTGATGGGTGATTCGCTCGAGAGCTACCCTCGCCGCGTTTTTATCGATGTGGGGCTGCCAGAGAAAGATGGAGGGAGCGGCACGGACTGGTTTGGCAAGACATACCCAACGAGGAACAAGAACTTTGAGATGTACAAGATAGAGACGGTGGCGGAGGGTGGTCCACAAATAGAGATGTCGGATTGGTTGAGGAAGAATGTGAGGGAGGAAGAGTATGTGGTGATGAAAGCTGAGGCTGAGGTGGTGGAGGAGATGGTGAGGAGTAAGGCCATAATGTTGGTGGATGAGCTTTTCTTGGAGTGCAAGCCACAGCAAGGGAACAGGAAGAGGAGGAACAGAAGGGCCTATTGGGAGTGTTTGGCTTTGTATGGGAAGCTGAGAGATGAAGGTGTGGCTGTGCATCAGTGGTGGGGTTga 1452 0.5117 MSSGGNLGCVLVAVDGSEESMKALRWALSNLKLRSPTPDSTDAPSFIIFHVQSPPSIATGLSPGSIPFGGPSDLEVPAFTAAIEAHQKRITNAVLDHALGICSEFNLTSKVRTHVVVGDPKEKICEAVQDLHADTLVMGSRAFGPIKRMFLGSVSNYCAHHSPCPVGCQCRILVADAASLLAKLIRSKVFTSWDLLDLLDQCCTSALKLICHFVVPMLARSCYKYVFSSLYVDNTAVRVKFLQLRVLSNCAVSTSIVLPNGSKRYLTPEASFTLISSTSTQQQAKPDPVAVNTETNLGTQRKLLGYVPEAKKAALQNLEDVLLEPPRAASGKSRVYLKRTRYLPDLMGDSLESYPRRVFIDVGLPEKDGGSGTDWFGKTYPTRNKNFEMYKIETVAEGGPQIEMSDWLRKNVREEEYVVMKAEAEVVEEMVRSKAIMLVDELFLECKPQQGNRKRRNRRAYWECLALYGKLRDEGVAVHQWWG 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2495 483 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 166 - -
Ssu6g2495 483 CDD USP_Like 10 166 - -
Ssu6g2495 483 PRINTS Universal stress protein signature 7 25 IPR006015 -
Ssu6g2495 483 PRINTS Universal stress protein signature 130 142 IPR006015 -
Ssu6g2495 483 PRINTS Universal stress protein signature 148 170 IPR006015 -
Ssu6g2495 483 PANTHER PROTEIN, PUTATIVE-RELATED 285 483 - -
Ssu6g2495 483 PANTHER OS02G0760400 PROTEIN 285 483 - -
Ssu6g2495 483 Pfam Universal stress protein family 108 166 IPR006016 -
Ssu6g2495 483 Gene3D HUPs 4 168 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2495 Ssu-Chr6 58839135 58847436 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2495 - - gmx:100814797 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2495 6 58839135 58847436 Ssu6g2495 6 58839135 58847436 ECH