Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2490 ATGGAGGTTGGGGCGTCCGATCCGAACCCGGTTCGGGTGAAGCGGGAAACCCTTGAGGCCGTGCTGGAACAGTGCCAGAGAGCCCTTGAACTCCTCAATGCTTCcgatgaaaatgaagaagaagacgACGACGTCGAAGATTCTGAGGAATCGCGTCCTTCCACGCGCCCCGATCCCGAAACCGATCAGCTGTGTGACCTGCTTAAATTTAGAGTGGAATGCCCTGACTTCCTTGAAAAGTTAGAGTATGCACAGGCATCGGTTTTGCACAACACGGCTGAAGAAGGCAATTCTTGGGATTTTGTTAGTGAAAATGATCTCTGGGAAGGTGAAGATGCTGACTCAGACCAAGAAGATTACGTCCTTGTTAGACAGGAAGATATAGTGGAAGGAATTGCGTGCTTCATGGCTGCGTATTTGTTGTCCCTCAAGAAACCAAGGATTTGA 447 0.4743 MEVGASDPNPVRVKRETLEAVLEQCQRALELLNASDENEEEDDDVEDSEESRPSTRPDPETDQLCDLLKFRVECPDFLEKLEYAQASVLHNTAEEGNSWDFVSENDLWEGEDADSDQEDYVLVRQEDIVEGIACFMAAYLLSLKKPRI 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2490 148 Coils Coil 15 51 - -
Ssu6g2490 148 PANTHER RING FINGER PROTEIN 6 145 - -
Ssu6g2490 148 PANTHER RING FINGER PROTEIN 6 145 - -
Ssu6g2490 148 MobiDBLite consensus disorder prediction 29 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2490 Ssu-Chr6 58732580 58735371 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2490 - - lja:Lj1g3v0203190.1 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2490 6 58732580 58735371 Ssu6g2490 6 58732580 58735371 ECH