LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu6g2487	ATGGAGCCCCGCTTCCAGGCGGCGCTGCGCGCCATGGAGGAGCTCGAGAAGGGCGCCATCGCCAACCCCGACGAGGGCCGCATGGTCGGCCACTACTGGCTCAGGGACTCCGCGCGCGCGCCCAACTCCTTCCTTAGAACGCTGATTGATAACACGCTCGACGCCGTTTGCAGGTTCGCCGACGACGTCGTCGCCGGTAAGATTAAGCCGCCGTCGTCGCCGGAGGGGAGGTTTACGCAGATACTTTCGGTTGGGATCGGAGGTTCCGCGCTTGGGCCGCAGTTTGTGGCGGAGGCGCTGGCTCCTGATAATCCTCCGCTCAAGATAAGATTTATTGACAACACGGATCCTGCTGGAATTGATCATCAGATTGCTCAACTTGGCCCTGAGTTAGCTTCGACGCTTGTGATTGTAATTTCGAAGAGTGGAGGTACCCCTGAGACTAGAAATGGCTTGTTGGAAGTACAGAAGGCCTTTCGGGAAGCAGGATTGAATTTTCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAACACTGCAAGAATTGAGGGCTGGTTGGCTAGATTTCCCATGTTTGACTGGGTGGGAGGTAGAACATCAGAGATGTCTGCAGTTGGCCTGCTTCCAGCAGCCCTTCAGAGCATTGACATCAGAGAAATGCTTGCTGGTGCAGCATTAATGGATGAGGCAAATAGGAGTACTGTGATAAGGAATAATCCTGCAGCTTTGCTGGCTTTGTGTTGGTATTGGGCTACAGATGGTGTAGGATCGAAGGATATGGTTATCCTTCCGTATAAGGACAGCCTGTTATTGTTTAGTAGATACTTGCAGCAGTTGGTCATGGAATCTCTAGGCAAGGAGTTTGACTTGGATGGTAATCGGGTTAATCAAGGAATTAGTGTCTATGGAAATAAAGGAAGCACAGATCAGCATGCCTACATTCAGCAACTGAGGGAAGGTGtacacaatttttttgtgaCATTCATTGAGGTGCTACGTGATAGACCACCTGGTCATGATTGGGAGCTTGAACCAGGTGTCACATGTGGCGACTACCTGTTTGGTATGCTACAGGGAACAAGGTCGGCCCTGTATGCCAATAACCGTGAATCCATCACAGTCACCGTGCAAGAAGTGACACCCAGATCAGTTGGCGCCCTTATTGCACTTTATGAACGGGCAGTTGGAATATATGCCTCACTTGTTAACATAAATGCTTATCACCAACCTGGTGTGGAAGCTGGTAAGAAAGCTGCAGGAGAAGTATTAGCACTTCAGAAGCGGGTATTGGCAGTGCTAAATGAAGCAAGCTGCAAGGATCCTGTCGAACCATTAACGCTTGAAGTAGTAGCTGACCGTTGCCATGCCCCAGAAGATaTTGAAATGATTTACAAGATCATTGCTCATATGGCTGCCAACGACAGAGCACTGATTGCTGAAGGTAACTGTGGTTCTCCGAGGAGCATCAAGGTTTTTCTTGGGGAGTGTAATCTTGATGAACTGTACGCTTGA	1524	0.4908	MEPRFQAALRAMEELEKGAIANPDEGRMVGHYWLRDSARAPNSFLRTLIDNTLDAVCRFADDVVAGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLNFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQSIDIREMLAGAALMDEANRSTVIRNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVQEVTPRSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKDPVEPLTLEVVADRCHAPEDIEMIYKIIAHMAANDRALIAEGNCGSPRSIKVFLGECNLDELYA	507

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu6g2487	507	PRINTS	Glucose-6-phosphate isomerase signature	81	100	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	PRINTS	Glucose-6-phosphate isomerase signature	371	389	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	PRINTS	Glucose-6-phosphate isomerase signature	403	416	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	PRINTS	Glucose-6-phosphate isomerase signature	269	290	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	PRINTS	Glucose-6-phosphate isomerase signature	193	211	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	PRINTS	Glucose-6-phosphate isomerase signature	389	403	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	CDD	SIS_PGI_1	50	216	IPR035476	-
	Ssu6g2487	507	Hamap	Glucose-6-phosphate isomerase [pgi].	2	430	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	Pfam	Phosphoglucose isomerase	368	428	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	Pfam	Phosphoglucose isomerase	12	337	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	Gene3D	-	67	212	-	-
	Ssu6g2487	507	ProSiteProfiles	Glucose-6-phosphate isomerase family profile.	1	436	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	SUPERFAMILY	SIS domain	9	430	IPR046348	GO:0097367\|GO:1901135
	Ssu6g2487	507	ProSitePatterns	Phosphoglucose isomerase signature 2.	403	420	IPR018189	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	Gene3D	-	213	412	-	-
	Ssu6g2487	507	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	507	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Ssu6g2487	507	CDD	SIS_PGI_2	262	426	IPR035482	-
	Ssu6g2487	507	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	507	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu6g2487	Ssu-Chr6	58705998	58712998	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu6g2487	K01810		-	gmx:100809452	984.556

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu6g2487	6	58705998	58712998	Ssu6g2487	6	58705998	58712998	ECH