Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2467 ATGTTCAGCGTTAAGGAATTAGTTGAATCGAATTGTCTGAGGTCCGTTCCCTCCGACTACATTTGCCTTAAAAATCCCGAAGAATCCATTTTGTATGAAACAGAGAATATTTCAACTATTGATTTTTCCGAACTCACCTCTTCCAATCCCGATGAACGCTCCAAGGCAATCCAACAACTAGGCGATGCTTGCCGCGACTGGGGTTTCTTTATGCTCATCAATCACGGTGTGTCGGGGACAATAAGGGATAAGATGCTTAGAGCAAGCCAGCGCTTTTTTGACCTGACTGAGGAAGAAAAAGGGGAGTACGCAGGAAGGAAGGTACTTGATCCAATAAGATATGGGACAAGCTTCAATGTCATGGTGGACAAGACGCTTTGCTGGAGAGATTATCTCAAATGTCATGTTCACCCTCACTTTAATGTTCCTTCCAAGCCCCCTGATTTTAGCGAAACTGTGGAGGAATACATCACAAAGAGCAGGGAGCTAGTTAGAGAGTTGCTAAAAGGAATATCTCGAAGCTTAGGCCTTAAAGAAAACTACATACATAAAAGCCTGAATGTAGAATTGAGCTCTCAGTTGCTTATTGTCAACTTTTACCCACCGTGTCCTGAGCCTGAACTTGTAATAAGCCTTCCTGCGCACGCCAACCATGGGCTTCTGACTCTTGTAATGCAAAACGAGCTTGGAGGCCTTCAAATTCAACATAACGGTAAGTGGATTCCTGTCCACGCCCTACCCAACTGCTTTCTCATCAACACCGGGGATCACACGGAGATACTGACCAATGGGAAATACAAGAGTGTTGTTCATCGCCCAGTGCACCAAATAGGCCAAGGTGCGAGTGTGGGCCAGAAAGCTAATGAGAGGGCCCAAACAACAGAACAAGCACATGAACCCAAAGACAAAGGGAGCGAGAGCTTGACCCTGGCAAAGCCTATTCCGTCAAAACTATCCGAGGATGAATTAAGGGATAGGCAGCGAAGAGATAAGGAGATGTTGCACACAATGCATATTTTAGACAAACAACAAGGCGAAAGGACTTGGTATGACAATATTCACCCTAGTTTTGTGGTAAAAACCTAG 1086 0.4494 MFSVKELVESNCLRSVPSDYICLKNPEESILYETENISTIDFSELTSSNPDERSKAIQQLGDACRDWGFFMLINHGVSGTIRDKMLRASQRFFDLTEEEKGEYAGRKVLDPIRYGTSFNVMVDKTLCWRDYLKCHVHPHFNVPSKPPDFSETVEEYITKSRELVRELLKGISRSLGLKENYIHKSLNVELSSQLLIVNFYPPCPEPELVISLPAHANHGLLTLVMQNELGGLQIQHNGKWIPVHALPNCFLINTGDHTEILTNGKYKSVVHRPVHQIGQGASVGQKANERAQTTEQAHEPKDKGSESLTLAKPIPSKLSEDELRDRQRRDKEMLHTMHILDKQQGERTWYDNIHPSFVVKT 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2467 361 MobiDBLite consensus disorder prediction 292 306 - -
Ssu6g2467 361 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 24 274 - -
Ssu6g2467 361 Pfam 2OG-Fe(II) oxygenase superfamily 193 272 IPR044861 -
Ssu6g2467 361 Gene3D - 1 305 IPR027443 -
Ssu6g2467 361 SUPERFAMILY Clavaminate synthase-like 4 274 - -
Ssu6g2467 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 37 139 IPR026992 -
Ssu6g2467 361 MobiDBLite consensus disorder prediction 278 325 - -
Ssu6g2467 361 PANTHER OS08G0480200 PROTEIN 24 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2467 Ssu-Chr6 58123646 58131659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2467 37 272 Glycosyltransferase AT5G59530 33.333 3.73e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2467 - - gmx:100799432 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2467 6 58123646 58131659 Ssu6g2467 6 58123646 58131659 ECH