Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2452 ATGGCTAATGCTGCTGACTTGATACAGCGCAGACAGCGTTCTGAATTTCAATCTCAAGTTAAGGGAACACTTTCTACGGCCATAAAGGGAAATCCTGATCTTATTCCATCCATACTGACACTGGCTCTAAATGATGCTTTGACTTATGATAAGGCAACAAAATCAGGTGGTCCAAATGGCTCTATACGGTTCAGCTCAGAAATAGGTAGACCAGAAAATACGGGGCTTTCTGCTGCCATGAATTTATTAGAGGAAGCAAAAAAGGAGATAGACTCATATTCCAAAGGTGGACCCATTTCCTATTCAGATCTGATCCAGTATGCAGCGCAAAGTGCTGCCAAGGCTACATTTTTAGCTGCTGCCATTCGCAAATGTGGTGGAAATgaggagaaaggaaaaatacTGTACAGTGCATATGGATCGAATGGGCAGTGGGGTTTGTTTGATAAGCAGTTTGGTAGGGCTGATGCTCAAGACGCAGATCCAGAGGGGAGAGTTCCAATATGGGGGAAGGCAAGTGTACAGGAAATGCAAGACAAGTTTTCTGCTGTAGGCTTTGGTCCTCGCCAGCTGGCTGTCTTATCTGCATTCTTAGGTCCTGATCAGAGTGCAACAGAAACCTTATTGGCCAGTGATCCTGATGTTGCTCCATGGGTTCAGAAATACCAAAGGAGTCGTGAAACAGTCTCTCAGACAGATTATGAGGTTGATCTAATAAccacttttacaaaattgagtACCTTTGGCCAACAAATCAACTATGAGGCATATACATATCCTCCCCCAAAGATCGACATTACCAAACTCAGATTGTGA 816 0.4203 MANAADLIQRRQRSEFQSQVKGTLSTAIKGNPDLIPSILTLALNDALTYDKATKSGGPNGSIRFSSEIGRPENTGLSAAMNLLEEAKKEIDSYSKGGPISYSDLIQYAAQSAAKATFLAAAIRKCGGNEEKGKILYSAYGSNGQWGLFDKQFGRADAQDADPEGRVPIWGKASVQEMQDKFSAVGFGPRQLAVLSAFLGPDQSATETLLASDPDVAPWVQKYQRSRETVSQTDYEVDLITTFTKLSTFGQQINYEAYTYPPPKIDITKLRL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2452 271 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC 2 269 - -
Ssu6g2452 271 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 2 269 IPR044831 GO:0004601|GO:0034599
Ssu6g2452 271 CDD plant_peroxidase_like 20 260 - -
Ssu6g2452 271 Coils Coil 76 96 - -
Ssu6g2452 271 Pfam Peroxidase 21 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2452 271 Gene3D - 4 184 - -
Ssu6g2452 271 Gene3D - 185 271 - -
Ssu6g2452 271 PRINTS Plant ascorbate peroxidase signature 53 63 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu6g2452 271 PRINTS Plant ascorbate peroxidase signature 67 91 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu6g2452 271 PRINTS Plant ascorbate peroxidase signature 35 50 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu6g2452 271 SUPERFAMILY Heme-dependent peroxidases 4 251 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2452 K00434 - gmx:100795192 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2452 6 57674920 57679447 Ssu6g2452 6 57674920 57679447 ECH