Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2447 ATGGAAAGGAGCAAAATACAAGCGCTTTACGATGCTGGTCATGCCTTGTTTTCCCAGGAGGGGCTTCCAACTTTTCAACAAATCCATTATCTGAAAAATTTGCTAGACAAAATTGAAGCTATAGATGTAGGAATCGACGAGTTCGGGTTGTGTGATTCTCCGATGTCAGACGCAAGTCACGCAACCGTTGATAGCAGCAAGGGGTTGCTTTGTGGACAAGGCTTCTCTGAGATAACATACATTCACATTCATGAATGTGACAATTTCTCTATGGGCGTGTTCTGTCTTCCAGCAGGAAAAGTATTTCCACTTCATGATCACCCGGGAATGACAGTGTTGAGTAAGCTCTTATATGGCTCTGCCTATGTCAAAGCTTATGACTGGATCACATTGGATTGTACTGGGTGCCAAACAATAGGATTGGCTGGCAGGGTAGTGGATGAAGTAATCAAAGCACCACATGAGCCATCCATATTATTTCCAAGAAGTGGTGGCAATATTCATTCTTTCACAGCGTTGACGCCATGTGCAATACTAGACGTGCTGTCTCCACCATACTCTGAAGAGTTTGGAAGGCCTTCCACTTACTACTCAGACATCCCTATCCCTTCTCTTAATGGTTATGCCATACTTGAGGAGAAACCGATGCCTAGTGACCTAGTTGTTCAAGGAGCGCCATATCTCGGACCTTCAATTGTAACCGTGGAAGATTATAACTTGGGTCAAATCGGTTTCGAAAACCACTTGTAA 750 0.4387 MERSKIQALYDAGHALFSQEGLPTFQQIHYLKNLLDKIEAIDVGIDEFGLCDSPMSDASHATVDSSKGLLCGQGFSEITYIHIHECDNFSMGVFCLPAGKVFPLHDHPGMTVLSKLLYGSAYVKAYDWITLDCTGCQTIGLAGRVVDEVIKAPHEPSILFPRSGGNIHSFTALTPCAILDVLSPPYSEEFGRPSTYYSDIPIPSLNGYAILEEKPMPSDLVVQGAPYLGPSIVTVEDYNLGQIGFENHL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2447 249 CDD cupin_ADO 87 187 - -
Ssu6g2447 249 Pfam PCO_ADO 34 232 IPR012864 GO:0016702
Ssu6g2447 249 SUPERFAMILY RmlC-like cupins 3 198 IPR011051 -
Ssu6g2447 249 PANTHER UNCHARACTERIZED 3 236 IPR012864 GO:0016702
Ssu6g2447 249 PANTHER OS09G0471000 PROTEIN 3 236 - -
Ssu6g2447 249 Gene3D Jelly Rolls 22 200 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2447 Ssu-Chr6 57592893 57594465 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2447 K23953 - gmx:100800920 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2447 6 57592893 57594465 Ssu6g2447 6 57592893 57594465 ECH