Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2432 ATGAGTCAGTGCTTGTTCAGCTTCACCGAAACCCGAAACCAGTGCTACCGGTCAGTGTTCGCCGGTGCGGGCCTCCGGTCCACGATCACCGACTTGAAAGAGGGAACCATAATGCATTGCTGGGTGCCGAAGGCCCGAACCGAAGCGAAGCCGAACCTGCTTCTGATCCACGGGCTCGGAGCCAACGCGCTGTGGCAATGGGGGGACTTCATCCGCCACGTCACGCCTTTCTTCAACGCATACGTGCCGGACCTTGTTTTCTTCGGCGGGTCCCACACGACCCGACCCGAACGGGGCGAGCGGTTCCAGGCGGAGTGCGTGATGCGGGTGATGGAGGCGCAGGGGGTGCGGCGGGTGAGCTTAGTAGGGCTGAGCTACGGCGGGTTTGTGGGGTACAGTATGGCGGCGATGTACGGAGAGGGGGTGGTGGAGAGGGTAGTGGTGTGTGGGTCCGGGGTGTGTGTGGAAGAGAGGGATGTTAAGGAAGGGCTTTTCCCTGTCACGGATTTGGACGAGGCTGCGAATATTTTGGTGCCGCAAACGCCGAACATGCTTATGGAGCTTGTCGGGTACACCTTTTTCAAACCTCCTCCGTTGTGGTGGTTGCCCTCGTGCCTCCTCCTTGATTTTATCGAGGCAATGTGCAGGGACTATGaacaagaaaagagagaattgaTAAAAGCCATTGCAAAGGACCGAAAACTTTCTGACCTCCCCAAAATATCTCAGCCTACATTAATTATCTGGGGAGAACATGATCAAGTATTTCCTTTAGAACTGGGTCACAGATTGAAAAGGTTAATAACACTTTTATTGTAG 819 0.5397 MSQCLFSFTETRNQCYRSVFAGAGLRSTITDLKEGTIMHCWVPKARTEAKPNLLLIHGLGANALWQWGDFIRHVTPFFNAYVPDLVFFGGSHTTRPERGERFQAECVMRVMEAQGVRRVSLVGLSYGGFVGYSMAAMYGEGVVERVVVCGSGVCVEERDVKEGLFPVTDLDEAANILVPQTPNMLMELVGYTFFKPPPLWWLPSCLLLDFIEAMCRDYEQEKRELIKAIAKDRKLSDLPKISQPTLIIWGEHDQVFPLELGHRLKRLITLLL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2432 272 Pfam Alpha/beta hydrolase family 53 257 IPR000073 -
Ssu6g2432 272 SUPERFAMILY alpha/beta-Hydrolases 34 268 IPR029058 -
Ssu6g2432 272 Gene3D alpha/beta hydrolase 14 270 IPR029058 -
Ssu6g2432 272 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 267 - -
Ssu6g2432 272 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Ssu6g2432 272 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Ssu6g2432 272 PRINTS Alpha/beta hydrolase fold signature 245 259 IPR000073 -
Ssu6g2432 272 Coils Coil 208 235 - -
Ssu6g2432 272 PANTHER SI:DKEY-122A22.2 5 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2432 Ssu-Chr6 57060997 57063171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2432 - - gmx:100808998 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2432 6 57060997 57063171 Ssu6g2432 6 57060997 57063171 ECH