Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2427 ATGCAGAAGAAGCTAGGATTTCCAATCTCCAAGAGCCTTGACCAATTCAAATCGTTGTACGGTTCAGTATCGGGAACTACGAAGCCATTATCTTCGCGTCCTTCTGCGGATTTCGTTTCATCGGGGAGTTTCGCGAACCTGAAGCTCACCGCAGAGAAATTGGTGAAAGAGCAAGCTTCGGTGAAGACTGATCTTGAAAATGCGAATGCTAAGCTTAAGAAGTCGCAGGAGTATGTGCATGCATTAGAAGAAAAATTGCAGAATGCCTTAAACGAAAATGCCAAGCTCAAGGTTAAGCAGAAGGAAGATGAGAAACTGTGGAAGGGATTGGAGTCTAAGTTCTCTTCTACTAAGACTTTATGTGATCAACTGACGGAGACTTTACAGCAGTTGGCTGGTCTAGTTCAGGATGCCGAAAAAGATAAGGAAACATTGGAAAACAAACTGTCAGCAAGTTCAGAAGCTCTTGATAGCTTGAATAAACGGATGGATGGTTTGTCTTTGAAGCTAGATTCTGCACAGGAAACAATTAGAACCCGTGATAACGAGCTAGAGAAGCTCAAATTTGCTACAGAAGAAAGGGAGAAGTTTCACAGAGATGAACAGTGCAGAGTTGCCAATGTTATACAACAGAAGGATACTATGATAAGGAGTTTAGAAGAAATGTTAACATCTAGTAGATTGGCTACAGAGAATTTGAACTCAAAGTTGGAAGAGGTTCACCTTCagttaaaagttaaagaagATGAAATTATGCAACATATAACCAGTCAAGAGAAattggagaaagaaaagagtgatCTTCAATTGCTGCAATGCTGGGCTTGCAGAAAAGCTTAA 840 0.3929 MQKKLGFPISKSLDQFKSLYGSVSGTTKPLSSRPSADFVSSGSFANLKLTAEKLVKEQASVKTDLENANAKLKKSQEYVHALEEKLQNALNENAKLKVKQKEDEKLWKGLESKFSSTKTLCDQLTETLQQLAGLVQDAEKDKETLENKLSASSEALDSLNKRMDGLSLKLDSAQETIRTRDNELEKLKFATEEREKFHRDEQCRVANVIQQKDTMIRSLEEMLTSSRLATENLNSKLEEVHLQLKVKEDEIMQHITSQEKLEKEKSDLQLLQCWACRKA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2427 279 Coils Coil 51 106 - -
Ssu6g2427 279 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 1 271 - -
Ssu6g2427 279 SUPERFAMILY Tropomyosin 78 265 - -
Ssu6g2427 279 Coils Coil 230 264 - -
Ssu6g2427 279 Coils Coil 121 176 - -
Ssu6g2427 279 PANTHER SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED 1 271 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2427 - - gmx:100788684 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2427 6 56886252 56890198 Ssu6g2427 6 56886252 56890198 ECH