Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2423 ATGGGCTACCTGATGATTAGTGAGTTTGGATTGTCAGAACTATTTAATTCAAGATCAGGTTGGGGAACTAATGAGGGGCTGATTATATCGATTTTGGCTCATAGGAATGCTGCTCAGAGGAAGCTTATCCGAGAAACTTATGCCAAGACCTATGGAGAAGATCTCCTTAAGGTCTTGGACAAAGAACTTACCAGTGATTTTGAGAGGCTGGTTCATCTTTGGACACTTGATTCTGCTGAACGTGATGCATTTTTGGCAAACGAGGCAACTAAAAAATGGACTTCAAGCAATCAGGTTCTGGTGGAAATAGCCTGCACTAGGTCCTCTGAACAATTGTTTTCTGGGAGGAAGGCTTACCATGCTCTTTATAAGAAGTCTCTTGAAGAGGATGTTGCTCATCACACAACAGGGGACTTCCGTAAGCTCCTACTGCCTCTGGTTAGTTCTTATCGATATGAAGGGGATGAGGTCAACTTGACCCTGGCAAAAACCGAGGCAAAATTGCTGCATGAGAAGATTTCAAAGAAGGCTTATAATGATGATGACTTCATCAGGATTTTGGCCACAAGGAGCAGAGCACAGATTACTGCTACTTTGAATCACTACAAAGATGAATTTGGAAAAGATATCAACAAGGACCTAAAGGCTGATCCAAAGGACGAGTTCCTGGCTTTACTAAGAGCAACTGTTAAGTGCTTGATCCGTCCTGAGAAGTACTTTGAGAAGGTTGTTCGTTTGGCTATCAACCGGCAAGGAACAGATGAAGGAGCCCTTTCAAGAGTGGTGGCCACAAGGTCCGAGGTCGATTTGAAGATTGTAGCAGATGAGTATCAAAGGAGGAACAGTGTCCCTCTTGAACGTGCCATTGTCAAGGACACCACCGGTGACTATGAGAAAATGCTTGTGGCGCTTTTAGGACAAGATGGTGCTTGA 933 0.4394 MGYLMISEFGLSELFNSRSGWGTNEGLIISILAHRNAAQRKLIRETYAKTYGEDLLKVLDKELTSDFERLVHLWTLDSAERDAFLANEATKKWTSSNQVLVEIACTRSSEQLFSGRKAYHALYKKSLEEDVAHHTTGDFRKLLLPLVSSYRYEGDEVNLTLAKTEAKLLHEKISKKAYNDDDFIRILATRSRAQITATLNHYKDEFGKDINKDLKADPKDEFLALLRATVKCLIRPEKYFEKVVRLAINRQGTDEGALSRVVATRSEVDLKIVADEYQRRNSVPLERAIVKDTTGDYEKMLVALLGQDGA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2423 310 ProSiteProfiles Annexin repeat profile. 77 148 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 Pfam Annexin 18 72 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 Pfam Annexin 82 146 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 Pfam Annexin 240 304 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 Pfam Annexin 165 226 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 SMART annex3 22 74 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 SMART annex3 252 304 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 SMART annex3 177 225 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 SMART annex3 94 146 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 PANTHER ANNEXIN 16 309 - -
Ssu6g2423 310 ProSitePatterns Annexin repeat signature. 252 304 IPR018252 GO:0005509|GO:0005544
Ssu6g2423 310 Gene3D Annexin 159 234 IPR037104 GO:0005509|GO:0005544
Ssu6g2423 310 Gene3D Annexin 10 76 IPR037104 GO:0005509|GO:0005544
Ssu6g2423 310 SUPERFAMILY Annexin 13 308 IPR037104 GO:0005509|GO:0005544
Ssu6g2423 310 ProSiteProfiles Annexin repeat profile. 4 76 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 PRINTS Plant annexin signature 155 175 IPR009118 -
Ssu6g2423 310 PRINTS Plant annexin signature 220 238 IPR009118 -
Ssu6g2423 310 PRINTS Plant annexin signature 113 127 IPR009118 -
Ssu6g2423 310 Gene3D Annexin 235 309 IPR037104 GO:0005509|GO:0005544
Ssu6g2423 310 Gene3D Annexin 77 147 IPR037104 GO:0005509|GO:0005544
Ssu6g2423 310 ProSiteProfiles Annexin repeat profile. 160 231 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 PRINTS Annexin family signature 248 268 IPR001464 GO:0005509|GO:0005544
Ssu6g2423 310 PRINTS Annexin family signature 292 305 IPR001464 GO:0005509|GO:0005544
Ssu6g2423 310 PRINTS Annexin family signature 59 75 IPR001464 GO:0005509|GO:0005544
Ssu6g2423 310 PRINTS Annexin family signature 168 194 IPR001464 GO:0005509|GO:0005544
Ssu6g2423 310 PRINTS Annexin family signature 86 107 IPR001464 GO:0005509|GO:0005544
Ssu6g2423 310 PRINTS Annexin family signature 19 41 IPR001464 GO:0005509|GO:0005544
Ssu6g2423 310 ProSiteProfiles Annexin repeat profile. 235 306 IPR018502 GO:0005509|GO:0005544
Ssu6g2423 310 PANTHER ANNEXIN 16 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2423 Ssu-Chr6 56779903 56782124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2423 K17098 - gmx:100784252 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2423 6 56779903 56782124 Ssu6g2423 6 56779903 56782124 ECH