Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2421 ATGAAGGGAGAGACGGCGACGCTGGTGCTGGTGAACCTGGCTGGGATAATGGAGAGAGCCGACGAGTCACTGCTTCCGGGAGTGTACAAGGAAGTGGGTGCGGCGCTTCACACGGACCCCACCGGACTCGGTTCCCTCACTCTCTTCCGATCCATAGTCCAATCCTCTTGCTACCCCATCGCCGCCTACCTAGCCATGCGCCACAACCGCGCCCACGTCATCGCCCTCGGGGCTTTCCTCTGGGCCGCCGCCACCTTCCTCGTTGCCTTCTCCTCAACCTTCTTTCAGGTAGCTTTATCGCGAGCATTTAATGGGATTGGCCTTGCACTTGTAGCACCTGCAATCCAGTCCCTAGTTGCTGACTCAACTGATGATAGTAATCGTGGCACGGCTTTTGGATGGCTTCAACTAACAGCCAATGTTGGTTCAATTATTGGTGGCCTCTTGTCAGTGTTGATAGCTCCAATAACAGTCTTTGGTATCCCTGGTTGGAGACTTTCCTTTCATATTGTTGGATTAATAAGCATTATAGTAGGTGCTTTAGTGTACCTCTTTGCCAATGATCCACACTTCTCAGATAATGATACAAATGATAGAAGGCTTGCTCCAAATAGAACATTTTGGTCTGAAGTGAAAGATCTGGTTCAGGAATCCAAGTCAGTTTTGAAGATTTCGTCTTTCCAGATTATTGTTGCACAGGGTGTCACTGGCTCCTTTCCCTGGTCTGCTTTATCATTTGCACCAATGTGGTTAGAGCTTACTGGCTTCTCCCATGAGAAAACTGCTTTCCTTGTAGCTTTGTTTGTGGTTGCCAGTTCTATTGGGGGATTGTTTGGAGGTAAGATGGGAGATATCCTCTCCAAGCGTCTTCCAAATTCTGGGAGGATAATTCTGGCACAGATAAGCTCTGGATCGGCAATCCCCCTAGCAGCACTTCTTTTGCTTGGTTTGCCAGATGATCCATCCACAATAATATCTCATGGTTTGGTTCTAATCATTATGGGGCTCTTGATATCTTGGAATGCTCCAGCTACAAataaTCCAATTTTTGCAGAGATAGTTCCAGAGAAATCCCGAACAAGTGTATATGCCTTGGACCGATCTTTTGAGTCTATACTATCATCGTTTGCTCCCCCTGCAGTGGGGATTTTGGCTCAGCATGTTTATGGATATAAGCCCATTCCTGAAGGGTCTAGTGAATCCCAAGAGATTTTAACAGACAGAGAGAACGCTGCATCATTGGCTAAGTCTCTTTACACAGCAATAGGAATTCCAATGGCTCTCTGCTGTATAATCTACACATTTCTTTATAGAACATATCCAAGAGACAGGGAACGAGCTAAGATGGAGGCTTTAATAGAATCAGAGATGCAGCAAATTGAATCAGGTGGTCTAGCCATGGATAGAGAGTTTGAGTCAGAAGAATTGTCTATTGCGGATTATGATGGTGATGTTGATGGTGATCTTGATGATGAAGAGAACACATTACTCTACCGGCAGTTGACACTTTCCAAAGAATAG 1521 0.4596 MKGETATLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQSSCYPIAAYLAMRHNRAHVIALGAFLWAAATFLVAFSSTFFQVALSRAFNGIGLALVAPAIQSLVADSTDDSNRGTAFGWLQLTANVGSIIGGLLSVLIAPITVFGIPGWRLSFHIVGLISIIVGALVYLFANDPHFSDNDTNDRRLAPNRTFWSEVKDLVQESKSVLKISSFQIIVAQGVTGSFPWSALSFAPMWLELTGFSHEKTAFLVALFVVASSIGGLFGGKMGDILSKRLPNSGRIILAQISSGSAIPLAALLLLGLPDDPSTIISHGLVLIIMGLLISWNAPATNNPIFAEIVPEKSRTSVYALDRSFESILSSFAPPAVGILAQHVYGYKPIPEGSSESQEILTDRENAASLAKSLYTAIGIPMALCCIIYTFLYRTYPRDRERAKMEALIESEMQQIESGGLAMDREFESEELSIADYDGDVDGDLDDEENTLLYRQLTLSKE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2421 506 PANTHER SPINSTER 1 462 IPR044770 -
Ssu6g2421 506 CDD MFS_spinster_like 8 433 IPR044770 -
Ssu6g2421 506 PANTHER - 1 462 - -
Ssu6g2421 506 Gene3D MFS general substrate transporter like domains 5 193 IPR036259 -
Ssu6g2421 506 Gene3D MFS general substrate transporter like domains 226 451 IPR036259 -
Ssu6g2421 506 SUPERFAMILY MFS general substrate transporter 7 445 IPR036259 -
Ssu6g2421 506 Pfam Major Facilitator Superfamily 13 378 IPR011701 GO:0022857|GO:0055085
Ssu6g2421 506 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 444 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2421 Ssu-Chr6 56732227 56736025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2421 - - gmx:100783378 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2421 6 56732227 56736025 Ssu6g2421 6 56732227 56736025 ECH