Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2393 ATGGCGAGAAAAACCAGTATCTGTGCCATATGCGAGAATTCGAATCAAGCTTCTACATGTTCTGTCTGCGTCAACTACAGGTTGAATGAGTATAATACTTCCTTAAAGTCACTGAAAGACCGTCGAGATTCGTTGTACTCAAAATTGAGCGAAGTTCTTGTCCGCAAGGGAAAGGGAGATGATCAAGCAAATTGGAGAGTGCTTCAACATGAAAAGCTTGCAAGGTTGAGGGAGAAGCTTCGTCACAGTAAAGAACAAGTTACTCAAGGAAGAGCTAAGATAGAGAGTATGTCTGCCAATCTGAAACTTAAATATGGGTTGCTTGAATCTGCCCTTTCTACGTTGGAAAAGAATCGAGTGGAACAACTGGAGAAGTTCTACCCTAATCTTATATGCACCCAGAGCTTAGGGCATgTGGGGATTACCTCTGAGCGTCTTCATAAACAGTCTGTGGTCATAAAACAGATATGCAAGTTGTTCCCACAACGCCGGGTGGTCatagagggagagagaagggaTGGTTGCAGTGGTCAATATGATCAAATTTGCAATGCACGATTACCCAGAGCACTTGATCCCCACTCTGTTCCATCAGAAGAGCTTTCTGCTTCTTTGGGATACATGGTCCAACTTCTAAATGTTGTTGTTCACAACTTGGCTGCCCCAGCACTTCATAACTCAGGTTTTGCGGGTTCTTGTTCTCGGATATGGCAACGAGATTCTTATTGGGATGCACGTCCTTCCTCGAGGAGCAATGAATATCCCCTTTTTATACCTCGCCAAAATTATTGCTCTACTGGTGGAGAAAACTCATGGTCTGATAGAAGCTCAAGCAATTTTGGAGTTGCTTCGATGGAATCTGAGAGGAGGCCTCGCCTAGATTCATCTGGGAGTAGTAGCTTTAGCTATTCTTTAGCTTCTTCACATTCTGTTCAAACACACAAAGATTTGCAGAAAGGAATTTCACTTTTAAAGAAAAGCGTAGCATGCATCACAGCTTACTGTTACAACTCCCTATGTTTGGATGTCCCTTCTGAGGCATCTACGTTTGAGGCATTTGCAAAGTTATTGGCTACACTCTCATCATCCAAGGAAGTTCGATCTGTTTTTTCCTTGAAAATGGCTCGCTCTAgGACATGCAAGCAAGTTCAACAATTGAACAAATCTGTATGGAATATGAATTCTGCTATTTCATCAACTACTTTGCTGGAAAGTGCGCATTCTGTGCCCACAACGAGAATTGAAAATTATCTGCCAAGTTCTACTGCTAGTTTTCTTTACGCCACTGATTTATCTGACGGCAAAAATGAGTGCCTAATTGAAGGGTGGGATATTGTGGAGCATCCCACTTTTCCTCCCCCACCATCTCAAAGTGAGGATGTTGAGCACTGGACTCGAGCCATGTTCATAGATGCTAAAAGGAAGTGA 1428 0.4209 MARKTSICAICENSNQASTCSVCVNYRLNEYNTSLKSLKDRRDSLYSKLSEVLVRKGKGDDQANWRVLQHEKLARLREKLRHSKEQVTQGRAKIESMSANLKLKYGLLESALSTLEKNRVEQLEKFYPNLICTQSLGHVGITSERLHKQSVVIKQICKLFPQRRVVIEGERRDGCSGQYDQICNARLPRALDPHSVPSEELSASLGYMVQLLNVVVHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNYCSTGGENSWSDRSSSNFGVASMESERRPRLDSSGSSSFSYSLASSHSVQTHKDLQKGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLATLSSSKEVRSVFSLKMARSRTCKQVQQLNKSVWNMNSAISSTTLLESAHSVPTTRIENYLPSSTASFLYATDLSDGKNECLIEGWDIVEHPTFPPPPSQSEDVEHWTRAMFIDAKRK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2393 475 Coils Coil 73 93 - -
Ssu6g2393 475 Coils Coil 28 48 - -
Ssu6g2393 475 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 8 366 IPR018791 -
Ssu6g2393 475 PANTHER DNA-DIRECTED RNA POLYMERASE II PROTEIN 1 475 - -
Ssu6g2393 475 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 1 475 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2393 - - gmx:100776426 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2393 6 55677049 55685435 Ssu6g2393 6 55677049 55685435 ECH