Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2371 ATGAAATCCAAAACCGGCGCAAACGGCCACGCGGCCGAGACCGGCGGCGGAGGAGGGAGCAGCAGCTCTCCGAGTCCGCCGCCGTCGCCGCTGCGGCACTCCGGCATTTCGCGGTGCCGGAGGCGGGTGCGGCCGGCGAAGGACTCGTCGGAGAGTCGGCGCCTGGTCGCCGGCATCATGGCGCGGCGGAGCCTCCGGTACTTCTTCCTGCTTCCGGTGGTGTACATCTCCGGCCTGCTGATGTGTGTGGGGCCCTTCTCCGCACTCATTGGCCACACTCCTCTTCCCGGTTCCCGGTACCGCAGTCACGAGATCTTTCACAACCTCTGGCACGATATCGAGGCCGATAATTCCTCTGCCATCGAGTTGGCTTCTGTGTGGAAGTACAAAAGGAAGTTGAGAGAGCAGAAGCCTTGTCCGAATTTGACGGCTTTGCATCGGGAACATTTTGTGTCGCCTGGACTGAATGGTTTTTTGATTGTGGAGGCCAATGGGGGTCTTAACCAGCAACGCTCTGCGATTTGTAATGCTGTGGCTGTGGCTGGACTTCTGAATGCAATACTAGTTATACCTCAATTTGAGTTTCACAATGTTTGGAAAGATCCAAGTGAATTTGGGGATATATACGATGAAGATCATTTTATATCAACACTTGATGGTTACGTGAAGGTGGTTAAAGAACTGCCAGAGGCACTAATGGAGCGGCATAATTACAATATGAGTAATATCACTAACATCAGAGTTCAAGCTTGGGCTCCTGTCAGTTATTACCTTGGAGTTGTTTCTCCTATCTTGCAAAAGGAAGGGGTAATTCGAATAGCTCCATTTGCCAATCGTTTGGCAATGAGTGTCCCTCCACATATTCAATTTCTAAGATGTCTTACTAATTATAGAGCATTGAGgttttcttcttcaatatctGCACTAGCTAAGAAACTAGTTTACCGAATGATTGAGAAGAGCTCAAGGACAGATGGAAAATACGTTGCTGTGCATCTTCGCTTTGAGGAGGATATGGTAGCATTCTCTTGTTGTGTATATGATGGAGGAGAGGCAGAAAAGTTGGAAATGGATTCAGTTCGAGAAAAAGGGTGGAGgggaaaatttaaaagaaaagatcGTATCATTTTACCTGATCTCAATCGAGTTGAAGGGAAATGCCCACTAACCCCTCTAGAgGTTGGTATGATGCTACGTGGCATGGGATTTGATAACAATACTTCAATATACTTGGCTTCTGGGAAAATATATCATGCAGAGAGATATTTGGCTCCTTTGATAAAGATGTTTCCCAATCTTTATACAAAGGAGTCTCTTGCAACATCAGATGAGCTTGCTCCTTTTATGGGCTATTCCTCCCAATTGGCTGCACTGGACTACATAGTCTGCTTGTCTAGTGAGGTTTTTGTAACAACTCAGGGTGGTAACTTCCCTCATTTTTTGATGGGCCATAGAAGATTCCTCTATGATGGCCATGCCAAGACCATTATCCCAGATAAGCGCAAGCTTGTTGTTCTTTTGGATGACGTGAGTATTAGTTGGAGAGCTTTCAAGGATCTGATGGAAGACATGCTCAGTGAAAGTGACCGCAAAGGAATCATGGTACCTAGAGTTagaaaaataaacagaaaaacaTCTGTCTACACGTACCCCTTACCAGAATGCAGGTGCCTACAGCAGTCTCTTGCCAATCAAATTGACCACAATCTTGACATTCTGGGTAATTACAACGGAACAAAAGCTTAA 1746 0.4548 MKSKTGANGHAAETGGGGGSSSSPSPPPSPLRHSGISRCRRRVRPAKDSSESRRLVAGIMARRSLRYFFLLPVVYISGLLMCVGPFSALIGHTPLPGSRYRSHEIFHNLWHDIEADNSSAIELASVWKYKRKLREQKPCPNLTALHREHFVSPGLNGFLIVEANGGLNQQRSAICNAVAVAGLLNAILVIPQFEFHNVWKDPSEFGDIYDEDHFISTLDGYVKVVKELPEALMERHNYNMSNITNIRVQAWAPVSYYLGVVSPILQKEGVIRIAPFANRLAMSVPPHIQFLRCLTNYRALRFSSSISALAKKLVYRMIEKSSRTDGKYVAVHLRFEEDMVAFSCCVYDGGEAEKLEMDSVREKGWRGKFKRKDRIILPDLNRVEGKCPLTPLEVGMMLRGMGFDNNTSIYLASGKIYHAERYLAPLIKMFPNLYTKESLATSDELAPFMGYSSQLAALDYIVCLSSEVFVTTQGGNFPHFLMGHRRFLYDGHAKTIIPDKRKLVVLLDDVSISWRAFKDLMEDMLSESDRKGIMVPRVRKINRKTSVYTYPLPECRCLQQSLANQIDHNLDILGNYNGTKA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2371 581 MobiDBLite consensus disorder prediction 1 51 - -
Ssu6g2371 581 PANTHER O-FUCOSYLTRANSFERASE 10-RELATED 22 563 - -
Ssu6g2371 581 PIRSF UCP009360 32 561 IPR024709 -
Ssu6g2371 581 Pfam GDP-fucose protein O-fucosyltransferase 158 487 IPR019378 -
Ssu6g2371 581 CDD O-FucT_plant 158 495 IPR024709 -
Ssu6g2371 581 PANTHER - 22 563 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2371 Ssu-Chr6 54749019 54755088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2371 157 557 Miscellaneous Gene Families AT1G22460 38.795 5.44e-90 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2371 - - gmx:100812590 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2371 6 54749019 54755088 Ssu6g2371 6 54749019 54755088 ECH