Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2353 ATGTTAGGATTAATAAACCCTGAAGAGGTTATTCTATTTGCCCCTTATTATGATTCTTACTTAGCCACTTTATCCATGGTTGGTGCAAAAGTGAAGGGCATCACTTTGCATCCTCCTGATTTTTCTGTCCCCATTGAAGAATTGAAGTCCACTATGTTAAAAGTTTATGACAAGTTGGCTTATGATATGGATCATGTTTTTATAGCTTCTTTGCTTGGAATGTTTGAAAGGATAGTTACAATGAACTCATTGGGGAAGATATTCTCTTTAATAGGATGGAAGATTGGATGGGCCATAGCCCCTCCACACTTGACATGGGGAGTGAGACAGACTCATGCTTTTCTAACTTTTGCTTCCACCATTCCTATGCAATGGGCAGCTACAGCAACTCTAAGAACACTAGATTCTAACTTTGTGGAACCAAAGAGGGGTTATATGGCAAAGATGGATATTTTGGTTGAAAGGTTGAAGGATATTGGCTTTAGGGTATTCCCACCTAGTGGAACCTACTTTGTGATTATGGATCACACACCTTTTGTGTTGGAAAATGATGTAACATTTTATGAATACCTGATTAAAGAGGTGGGGGTGGCTGCAATTCCTATCAATGTGTTTTATTTGAATTCAGAGGAGGAAAAGAATCTAGTAAGGTTTATTTTCTACAAGGATGAGGGAACTCTAAAGGTTGTTGTTGAAAGAATGAAAGACAagcttaaaagaaaatga 726 0.3719 MLGLINPEEVILFAPYYDSYLATLSMVGAKVKGITLHPPDFSVPIEELKSTMLKVYDKLAYDMDHVFIASLLGMFERIVTMNSLGKIFSLIGWKIGWAIAPPHLTWGVRQTHAFLTFASTIPMQWAATATLRTLDSNFVEPKRGYMAKMDILVERLKDIGFRVFPPSGTYFVIMDHTPFVLENDVTFYEYLIKEVGVAAIPINVFYLNSEEEKNLVRFIFYKDEGTLKVVVERMKDKLKRK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2353 241 Gene3D Aspartate Aminotransferase, domain 1 121 236 IPR015422 GO:0003824
Ssu6g2353 241 CDD AAT_like 1 236 - -
Ssu6g2353 241 PANTHER FI04487P 55 240 - -
Ssu6g2353 241 Pfam Aminotransferase class I and II 55 233 IPR004839 GO:0009058|GO:0030170
Ssu6g2353 241 Gene3D - 55 120 IPR015421 GO:0003824
Ssu6g2353 241 SUPERFAMILY PLP-dependent transferases 6 239 IPR015424 -
Ssu6g2353 241 PANTHER FI04487P 1 52 - -
Ssu6g2353 241 Gene3D - 5 51 IPR015421 GO:0003824
Ssu6g2353 241 PANTHER FI04487P 1 52 - -
Ssu6g2353 241 PANTHER FI04487P 55 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2353 Ssu-Chr6 53761684 53762532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2353 K23977 - tcc:18592299 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2353 6 53761684 53762532 Ssu6g2353 6 53761684 53762532 ECH