Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2350 ATGCAACCCAAGGATTCTCGCTTAAGTTTCGGCCTTAACTGGTGCAATCTGCAGTGCAGTTGTTGGGTGGTAACCAGTCCGCGGATTTCTCCCTCTGCAAACTCTTCTTCCATTCTGCACAAAGTGATGGGTTTATCAAAGGAACAGCTTCTTGCGCGGTTAAAGGAgcttcatattaatttttcccAGTTTGAGCATCCGGTTATTTTGACAGTTGAGGAAGGGGAAAAGTATGTTGGACATTTAGGGAGTGGACTGAgtaaaagtttgtttttgaaGGACAAGAAACAGCGGTTCTATCTTGTTTCTGCTTTGAAGAATACCAAAGTAGATATAAAAGTGTTATCTCAGCGGCTTGGTTTAGGAAAAGGAGGTCTAAGAATGGCGCCTGCAGAGGCTTTAGGTGAAATACTTCAGGTGCCCTTGGGTTGTGTGACTCCATTCGCGGTAGTGAATGAATCTGCACGAGATGTTTCACTATTATTGGATCAAGGGTTCAAGACTCAGGAACACTGCTTCTTCCATCCACTGTCAAATGACATGACCATATCTATAAACTCTAATGATCTGAACAAACTTCTCAAGTCGATAGGAAGGGATCCCTCATATGTTGATTTCGAGGCCAATCCTCCAGTGGGGAAAGATCATCCACCTGATCTAGCTGCACTAGTTCCATCTGGCTCAATAAATTTGCCTGACCAACCAGAAAAGCAACCTGCATCACAAGTTCCTACAGACGGAAACCATACTTCTGTGGAAAATGAGTCCAAGATGATTTCAGCAAAAGTTGTCAATCCATCCGTTAGTGGGAAAAATACAAAGGAGAAAGCAGTCAACAAAGCTCATTCATCAGGCAACTTTGCAGATGTTGAGCTATTTGTTGAAGAACTATTGCATAAAACATCAAGCTTATTGCTTTCAGAGATCAAGGAAGACACTATAACGCAACATGGAGAGAATTTGGGCACTGTTGTGTCTGACAATCTACAGAAAGGTCTGAGCTCAGATTTGGCAAACCTTGCTATGATATTCAAGAACACAGCATACACTGAAGGGTTCCATGCTGGTTCTCACCATCAACCCAGACACTTGTGA 1095 0.4174 MQPKDSRLSFGLNWCNLQCSCWVVTSPRISPSANSSSILHKVMGLSKEQLLARLKELHINFSQFEHPVILTVEEGEKYVGHLGSGLSKSLFLKDKKQRFYLVSALKNTKVDIKVLSQRLGLGKGGLRMAPAEALGEILQVPLGCVTPFAVVNESARDVSLLLDQGFKTQEHCFFHPLSNDMTISINSNDLNKLLKSIGRDPSYVDFEANPPVGKDHPPDLAALVPSGSINLPDQPEKQPASQVPTDGNHTSVENESKMISAKVVNPSVSGKNTKEKAVNKAHSSGNFADVELFVEELLHKTSSLLLSEIKEDTITQHGENLGTVVSDNLQKGLSSDLANLAMIFKNTAYTEGFHAGSHHQPRHL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2350 364 CDD PrdX_deacylase 47 204 - -
Ssu6g2350 364 MobiDBLite consensus disorder prediction 231 257 - -
Ssu6g2350 364 SUPERFAMILY YbaK/ProRS associated domain 46 206 IPR036754 GO:0002161
Ssu6g2350 364 MobiDBLite consensus disorder prediction 206 257 - -
Ssu6g2350 364 Gene3D - 37 213 IPR036754 GO:0002161
Ssu6g2350 364 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 43 362 - -
Ssu6g2350 364 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 43 362 IPR040285 -
Ssu6g2350 364 Pfam Aminoacyl-tRNA editing domain 66 193 IPR007214 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2350 Ssu-Chr6 53694765 53706349 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2350 - - gmx:100812776 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2350 6 53694765 53706349 Ssu6g2350 6 53694765 53706349 ECH