Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2337 atggtaatgTGGGTATTTGGGTATGGTTCCTTGATCTCGAAAGCTGGGTTTCACTACGATGAACGTGTTGTTGGTTTCATCAAAGGCTATCGACGTGTCTTCTACCAAGGCTCTACTGACCACAGAGGGACCCCTGAGTTCCCTGGAAGAACAGTGACCCTGGAGCCTGCTGAAGGAGAAATATGTTGGGGAGCTGCTTACAAGATCTCAaagaaagaagatgaagaaataGCATTAGCgTATCTGGAAGTTAGGGAGAAGCAATACGACAAGAAGGAATACCTTGACTTTTACACTGATCCTACCGCTACTTCTCCAGCCGTTTCTGGAGTGATGGTATATATAGCAACTCCAGACAAGAAATCTAACGTAAATTATTTGGGCCCTGCATCTGTTGAAGAGATTGCAAGGCAAATAATTCAGGCTGAAGGTCCCGCAGGACCTAACAGAGATTATCTTTTCAACCTTGAAAAGGCTCTTCTTCAAATAGGATGCGAAGACAAACATGTTATTGATCTTGCAACTGAAGTCAGGCGTGTTCTTGCAGAGGAACACTGA 558 0.4247 MVMWVFGYGSLISKAGFHYDERVVGFIKGYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGEICWGAAYKISKKEDEEIALAYLEVREKQYDKKEYLDFYTDPTATSPAVSGVMVYIATPDKKSNVNYLGPASVEEIARQIIQAEGPAGPNRDYLFNLEKALLQIGCEDKHVIDLATEVRRVLAEEH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2337 185 Pfam ChaC-like protein 3 179 IPR006840 GO:0003839|GO:0006751
Ssu6g2337 185 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 2 184 IPR006840 GO:0003839|GO:0006751
Ssu6g2337 185 Gene3D - 2 180 - -
Ssu6g2337 185 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 1 121 IPR036568 -
Ssu6g2337 185 CDD GGCT_like 5 116 IPR013024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2337 Ssu-Chr6 53162491 53167032 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2337 K22596 - gmx:100305985 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2337 6 53162491 53167032 Ssu6g2337 6 53162491 53167032 ECH