Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2336 ATGCGAAGCGTAGAGGTGGCCAAGACGGTGCTGGAGGTCGCCGACGTGGCTTGGACCGCCGTAGAACACacccaccactatcaccgcCGCCGCAATCATCCCGTCGCCGGCGACAATGACTGCCCCTCCGACCAAGACTTGGAGTCTCTGCGATCAGAAAATCGACGCCTCAGGAACTTGCTCGACCAGAATCTCAAACTGCTCCAAAACCTCTCCGACTCACCTTGCTTCGATAATTGCCCTCCCGATTTGAATGACCAGTTAGTTGCTACCATGAGGTCTGATGAGTACCTGACTCGGCTCAAGTTCCTACAACAAGAAACTGCTAGCGATGGAAATCAATTTCCCTTCAAGGAGGCTACTGAACTTGATTATCGATCAGCTGACATTTTGGTCAATGTTGACTCTCAAGAACCCAGTTGGTGGGTTTGGGTTACAGATGAGATGGATCCTAGTAATGTTGAGGAATTGAGTGGAATTGATGATGAGAATTACTTGGTCATCAGTGAGGAACATGTGGTGGATGGTGTTGCCAACTTTATGGCCAGATGCATTTTGTCAAACCCAAAAGCTCTGAATTTGTCACCAGAGGAACTGCAGAAAGCACTATCAAAAGCATTGCAAGGAACAAGCAAACTGGAAAAGATTTTAGATATTTGGCATGCTGGAAAGTTGTTTTATGCTCTGTCTACCTGGGGACTTGCTTTGGCAGGGCTTTACCAAAGTCGTGCACTGTTAAGAATTGCGGCAAAGGGTGTTCATTCAGGCAGTAAACTTGCTCTCAAGGCTCTCTAA 795 0.4642 MRSVEVAKTVLEVADVAWTAVEHTHHYHRRRNHPVAGDNDCPSDQDLESLRSENRRLRNLLDQNLKLLQNLSDSPCFDNCPPDLNDQLVATMRSDEYLTRLKFLQQETASDGNQFPFKEATELDYRSADILVNVDSQEPSWWVWVTDEMDPSNVEELSGIDDENYLVISEEHVVDGVANFMARCILSNPKALNLSPEELQKALSKALQGTSKLEKILDIWHAGKLFYALSTWGLALAGLYQSRALLRIAAKGVHSGSKLALKAL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2336 264 Coils Coil 47 70 - -
Ssu6g2336 264 PANTHER RING FINGER PROTEIN 3 264 - -
Ssu6g2336 264 PANTHER EXPRESSED PROTEIN 3 264 - -
Ssu6g2336 264 MobiDBLite consensus disorder prediction 27 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2336 Ssu-Chr6 53129784 53134872 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2336 - - gmx:100305904 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2336 6 53129784 53134872 Ssu6g2336 6 53129784 53134872 ECH