Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2332 ATGCAAAGTGGAGGGTCATTGTTGAAGCAATTGAGTGTGAAGGAGGCTTGGAAATCAACATCAAATAGGTGGAGTGGGAAGGACAAGTATAACAGTGTTGGGGGAGGGAGCATTGAGGGGTGTGAGGCAAGTCTGAGCCAAATGGAAGGTTTTGCTATGTATGGGAATGAGGACAATGGGATGATGGGGAAGAAGagagtgatggtggtggtggatcACACTTCCCATTCCAAGCATGCAATGATGTGGGCACTCACCCATGTAGCTAATAAGGGTGATTTGCTCACTTTGCTTCATGTTGTCCCTCCTCATAGGGGTTCTGAATCTTCTTGTTCTACCTATCTTGTCAATCATCTTGGTTCCCTTTGCAAAGATTGCAAGCCGGAGGTGGAAGTGGAAGCACTTGTAATTGAAGGACCAAAACTGGCCACAGTGATGAGCCAAGTGAAGAAGCTGGAGGTTTCTGTCTTGGTATTGGGCCAAAAGAAGCCCTCTCCTCTTCTTAGCTGCCTGTGTGGAAGCAACAGCTGCAGCAGCTCAGAGGAGTTTGCTGAGCACTGCATCAACAACGCAGAATGCTTGACAATAGGAGTGAGGAAGAGAAGTCAAGGCAACAATGGCTACCTTATCAGCACAAGGTGGCAGAAGAACTTCTGGCTACTGGCTTAG 669 0.4604 MQSGGSLLKQLSVKEAWKSTSNRWSGKDKYNSVGGGSIEGCEASLSQMEGFAMYGNEDNGMMGKKRVMVVVDHTSHSKHAMMWALTHVANKGDLLTLLHVVPPHRGSESSCSTYLVNHLGSLCKDCKPEVEVEALVIEGPKLATVMSQVKKLEVSVLVLGQKKPSPLLSCLCGSNSCSSSEEFAEHCINNAECLTIGVRKRSQGNNGYLISTRWQKNFWLLA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2332 222 Pfam Universal stress protein family 65 176 IPR006016 -
Ssu6g2332 222 Gene3D HUPs 64 202 IPR014729 -
Ssu6g2332 222 CDD USP_Like 66 193 - -
Ssu6g2332 222 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 63 176 - -
Ssu6g2332 222 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2332 Ssu-Chr6 53052298 53054461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2332 - - gmx:100816511 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2332 6 53052298 53054461 Ssu6g2332 6 53052298 53054461 ECH