Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2331 ATGGAAGAAGGGCTTGTTTGCCAGTGGAGCGTGTTTAGATCTCTCTTGGCAATCCTTCAGTGGTGGGCGTTCAATGTCACCGTCATTATCATCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTTCCACTGTCGGTATCCTGCATCCACTTTATCTGCTCAGCCATTGGAGCATATGTTGTGATTAAGGTGTTGAAGCTTAAACCGCTGATATCTGTTGACCCTGAAGATTGCTGGAGAAGAATCTTTCCTATGTCATTTGTGTTCTGTATTAACATTGTGCTGGGGAATGTGAGTCTACGATACATACCAGTTTCTTTTATGCAGACAATAAAGTCATTCACCCCTGCAACAACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAATATTTTGACTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACGTCTGTTACAGAGCTTAGCTTTAATGTATTTGGGTTTTGTGCTGCCCTATTTGGCTGTTTGGCTACATCTACAAAGACTATCCTTGCAGAGTCTCTGTTGCATGGATACAAATTTGACAGCATAAACACAGTTTATTACATGGCCCCTTTTGCAACCATGATCTTGGCAATACCTGCTATGTTACTTGAAGGCAATGGAGTTCTTGAGTGGCTAAATACTCATCCATATCCTTGGTCGGCCCTGATCATTATTTTCAGCTCTGGAGTTTTGGCGTTCTGCCTTAACTTCTCCATTTTTTATGTGATTCATTCCACCACTGCTGTAACATTTAATGTTGCTGGAAACCTTAAGGTTGCTGTTGCTGTCCTTGTTTCTTGGCTAATTTTTAGGAACccaatatcatatttaaatgcTGTTGGATGTGCCGTGACTCTTGTTGGATGTACATTCTATGGTTATGTGAGGCATATGCTCTCCCAACAGCCACCAGTTCCAGGAACTCCTCGGACACCAAGGACTCCTAGGAGTAAGATGGAGTTGCTTCCTCTTGTAAATGACAAATTAGATGATAAggtctaa 1029 0.4111 MEEGLVCQWSVFRSLLAILQWWAFNVTVIIINKWIFQKLDFKFPLSVSCIHFICSAIGAYVVIKVLKLKPLISVDPEDCWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNVFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILAIPAMLLEGNGVLEWLNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNAVGCAVTLVGCTFYGYVRHMLSQQPPVPGTPRTPRTPRSKMELLPLVNDKLDDKV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2331 342 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Ssu6g2331 342 PANTHER GDP-MANNOSE TRANSPORTER GONST5 1 327 - -
Ssu6g2331 342 PANTHER SOLUTE CARRIER FAMILY 35 1 327 - -
Ssu6g2331 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 71 152 - -
Ssu6g2331 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2331 Ssu-Chr6 53045009 53050219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2331 1 342 Organic Solute Cotransporters AT1G77610 89.796 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2331 K15285 - gmx:100817042 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2331 6 53045009 53050219 Ssu6g2331 6 53045009 53050219 ECH