Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2326 ATGAGTCCCTACATTTTCGGAGTCGTAGTCCCTCTCCTCCTTACTCTCCTCGTCCGCACCAACTCCAAGGACCGAAAACGACGCGGCGTTCCGATCGAGGCCGGCGGCGAACCCGGTCTAGCGATCCGGAACCGTCGGTTCGAGTCGCCGGTTCGGAGCGCATGGGAAGGGGTGGCGACGCTGGCGGAGCTGTTCGAGGAGGCATGCAGGACGCGCGGGGAGAGGCTTCTGCTGGGGACGCGCGGGGTGCTGTCGAGGGAAGTGGAGACCGGCCACGACGGCAGGTCGTTCGAGAAGCTCCACCTGGGGGACTACCAGTGGCTCTCTTACGACAAGGTGTTTGACGTCGTTTCCGGGTTTGCCTCTGGGTTAGCCTACATCGGACACCTCAGGGAAGAGCACGCCGCCATCTTCGCCGACACGCGCCAAGAGTGGTTCATGGCGCTCCAGGGTTGTTTCAGGCGAAATGTGACAGTTGTGACTATATATGCATCATTGGGAGAGGAAGCTTTATGTTACTCATTGAATGAGACAGAGGTTACAACAGTGATTTGTGGGCAAAAAGAATTGAGAACACTTGTAAACATTAGTGGACAACTAGACTCAGTGAAACGTGTGATATGCATGGATGATGATATCCCACCTGATGCCTCATCTATTGCAAATGACTGGATAATCACTTCCTTTGCTGAGGTTGAGAGACTTGGTAGAGAAAATCATGTTGATGCTGATTTACCTCTTTCAGCAGATGTCGCAGTTATAATGTATACGAGTGGAAGTACAGGATTACCTAAGGGTGTGATGATGACACATGGCAACGTCTTAGCTACACTCTCTGCTGTGATGACAATTGTTCCAAACATTGGGACAAAGGATATATATCTTGCATACTTACCGATGGCTCATATCCTAGAATTAGTAGCTGAGAATTTGATGGCAGCTGTTGGGGTCCTTATAGGATATGGATCACCTTTGACCCTTACTGATACatcaaacaagataaaaaaaggaacaaagggGGATGCTACTGCATTGAGGCCAACTTTATTGGCAGCTGTACCAGCAATTCTTGATCGTGTTCGTGATGGAGTGTTCAAGAAGGTAAATGCAACAGGAGGATTGCCAAAGAAGTTGTTTCATTTAGCCTATGCACGGAGGTTGCAAGCAGTTAATGGTAGTTTGTTTGGAGCTTGGGGCTTGGAAAAGGCTCTTTGGAATTTTCTTGTGTTCAAAAAGGTCCGAGCAGTTCTGGGTGGTCGTATCCGTTTTATACTGTCCGGTGGTGCTCCCCTTTCTGGTGATACCCAGAAGTTCATCAATATTTGTCTCGGTGCTCCAATCGGTCAAGGATATGGTCTTACAGAGACTTGTGCTGGTGGGACATTCTCTGATTTTGATGATACATCTGTTGGCCGTGTTGGACCACCTCTTCCATGCTCAtttattaagTTAATCGACTGGCCTGAAGGTGGATATTTAACAAATGACTCACCAATGCCCCGTGGTGAAATTGTAATTGGTGGTCCAAATGTCACTCTGGGGTATttcaaaaatgaagaaaaaacaaaagaatcatACAAGGTTGATGAAAGAGGAATGAGGTGGTTTTACACTGGTGACATTGGGAGATTTCATCCAGATGGATGCCTTGAAATCATTGATCGTAAAAAGGACATTGTTAAACTGCAGCATGGAGAATATGTCTCCTTGGGAAAGgTTGAGGCAGCTCTTATTGTTAGCCGCTTCGTGGACAATATTATGGTTCATGCTGATCCTTTCCATAGTTACTGTGTGGCTCTTGTTGTGGGTTCTCAGTCCACATTGGAAGAATGGGCTTCAGAACAAGGAATTTctgatttcaatttttcagaacTGTGTGCGAAAGAAGAAACTGTGAAGGAGGTGCATGCATCACTTGTAAAGGAAGGAAAGAAGGCTCGTTTGGAGAAATTTGAGATTcctgcaaaaattaaattgctttcTGATCCATGGACTCCTGAGTCTGGCCTAGTCACTGCTGCTCTCAAACTCAAGAGAGAGGCCATAAAAAGACTTTCGATGAAGAACTTTCCAAGTTGTATGCTTCATAGGCTAAGGACACTACAAATCTTTTTACACCTTTTTCCCATTTGCATCGGGCAGGGGTTGAGGCGAGGAgaggttttgtatttttttgttgctaatcttttttttttttccatttcaagTTCATCATGTACAGTAAGGCTTATTTCGTGCAGAGGGCCAATATGTTGA 2256 0.4406 MSPYIFGVVVPLLLTLLVRTNSKDRKRRGVPIEAGGEPGLAIRNRRFESPVRSAWEGVATLAELFEEACRTRGERLLLGTRGVLSREVETGHDGRSFEKLHLGDYQWLSYDKVFDVVSGFASGLAYIGHLREEHAAIFADTRQEWFMALQGCFRRNVTVVTIYASLGEEALCYSLNETEVTTVICGQKELRTLVNISGQLDSVKRVICMDDDIPPDASSIANDWIITSFAEVERLGRENHVDADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIVPNIGTKDIYLAYLPMAHILELVAENLMAAVGVLIGYGSPLTLTDTSNKIKKGTKGDATALRPTLLAAVPAILDRVRDGVFKKVNATGGLPKKLFHLAYARRLQAVNGSLFGAWGLEKALWNFLVFKKVRAVLGGRIRFILSGGAPLSGDTQKFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSFIKLIDWPEGGYLTNDSPMPRGEIVIGGPNVTLGYFKNEEKTKESYKVDERGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSRFVDNIMVHADPFHSYCVALVVGSQSTLEEWASEQGISDFNFSELCAKEETVKEVHASLVKEGKKARLEKFEIPAKIKLLSDPWTPESGLVTAALKLKREAIKRLSMKNFPSCMLHRLRTLQIFLHLFPICIGQGLRRGEVLYFFVANLFFFSISSSSCTVRLISCRGPIC 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2326 751 Gene3D - 51 555 IPR042099 -
Ssu6g2326 751 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 15 685 - -
Ssu6g2326 751 Pfam AMP-binding enzyme 103 563 IPR000873 -
Ssu6g2326 751 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 685 - -
Ssu6g2326 751 SUPERFAMILY Acetyl-CoA synthetase-like 57 686 - -
Ssu6g2326 751 ProSitePatterns Putative AMP-binding domain signature. 254 265 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2326 Ssu-Chr6 52923096 52937129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2326 149 684 Acyl Lipid Metabolism Gene Families AT1G77590 79.664 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2326 K01897 - gmx:100803677 1258.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2326 6 52923096 52937129 Ssu6g2326 6 52923096 52937129 ECH