Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2319 ATGGAGTTTCCTTGCCCTGCCAAGTTTCATACCACACGTTTGCCCCTTTTTGTGATTTTATCTATTGCTACAATTGTACCAAACCCGATATTTGCAACCAAAGAATGTGCTTTCCCTGCCATCTTCAACTTTGGTGACTCAAACTCAGATACTGGTGGCTTGGCTGCTTCCCTTATTGCACCAACACCCCCATATGGAGAGACCTATTTTCACAGACCAGCAGGAAGGTTTTCTGATGGCCGTCTCATCATTGATTTCATAGCAAAGAGTTTTGGACTCCCGTATCTAAGTGCATATCTCGATTCCCTGGGGACCAACTTCTCACATGGTGCGAACTATGCAACAGCAGCATCAACAATTACACTCCCGCCTAGTGTTATACCTCTGGGTGGATTCAGTCCTTTCTACCTTGATATTCAGTATACTCAATTCAGCGAGTTCAAATCCAGAACACAATTCATTAGACATCATGGAGGCATATTTGCAAGCTTGATGCCCAAACAAGAGTATTTTCATAAAGCTTTGTACACATTTGATATCGGTCAAAATGATCTTGGAGCTGGCTTTTTTGGAAATTTGACTGTACAGCAAGTCAATGCTTCTGTACCTGATATAGTCAGTGCTTTCTCAAAAAATGTGAAGGACATATATGATTTGGGAGCAAGATCATTTTGGATACACAACACAGGACCCATTGGCTGCCTCCCTTACATTTTGGCCAGTTTTCTATCAGCCGAAAGGGATGCCTATGGTTGTGCAAAGCCATATAATGAAGTAGCTAAGTATTTCAACCACAAGTTAAAGGAAGCTGTGGTTCAGCTTCGCAAAGACCTTCCTCTAGCTGTAATCACATATGTAGATATCTACTCTGTTAAGTACTCTCTTTTCAGCCACCCAAAGAAATATGGATTTGAGCTCCCACTAGTTGCTTGCTGTGGCTATGGAGGGGAGTACAACTACAGCAGTAGTGTTGGATGTGGAGGAACCATAGAGGCCAATGGTACTGAAATTTTTGTGGGTTCATGTGAAAGGCCATCAGTTAGAGTGAATTGGGATGGGATCCACTACACAGAGGCAGCTAACAAGTTCATATTTGATCAAATTTCTACTGGGGCTTTCTCAGAACCACCTCTTCCCTTGAATATGGCATGTCACAGAAATTCCATTAAAAAGTAG 1176 0.4226 MEFPCPAKFHTTRLPLFVILSIATIVPNPIFATKECAFPAIFNFGDSNSDTGGLAASLIAPTPPYGETYFHRPAGRFSDGRLIIDFIAKSFGLPYLSAYLDSLGTNFSHGANYATAASTITLPPSVIPLGGFSPFYLDIQYTQFSEFKSRTQFIRHHGGIFASLMPKQEYFHKALYTFDIGQNDLGAGFFGNLTVQQVNASVPDIVSAFSKNVKDIYDLGARSFWIHNTGPIGCLPYILASFLSAERDAYGCAKPYNEVAKYFNHKLKEAVVQLRKDLPLAVITYVDIYSVKYSLFSHPKKYGFELPLVACCGYGGEYNYSSSVGCGGTIEANGTEIFVGSCERPSVRVNWDGIHYTEAANKFIFDQISTGAFSEPPLPLNMACHRNSIKK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2319 391 Pfam GDSL-like Lipase/Acylhydrolase 41 368 IPR001087 GO:0016788
Ssu6g2319 391 CDD SGNH_plant_lipase_like 39 371 IPR035669 -
Ssu6g2319 391 PANTHER ESTERASE-LIKE ISOFORM X1 15 387 - -
Ssu6g2319 391 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 15 387 - -
Ssu6g2319 391 Gene3D SGNH hydrolase 30 371 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2319 Ssu-Chr6 52765911 52767805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2319 39 382 Acyl Lipid Metabolism Gene Families AT4G10950 27.731 6.97e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2319 - - gmx:100779094 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2319 6 52765911 52767805 Ssu6g2319 6 52765911 52767805 ECH