Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2299 ATGGGCATCTTTTTGGAGGGAGAAGACAGAGTCCAAACTCCAAAGTCTGCACTTCCATGGCCGGCACGTGACCCTTCTCTCACTCAAACTCTCTCTGAAACCTTCCACCTCTCCTCTCTTTCTCCGTCAATGTCTTCCGCCGCCGGCTACACTCGCTCCTCCCAAAGAGCCTCCGTCTCGCCGCTCCGGTCACGGAAGTCGCCGGCGGGAGCCACCAAACCCGCCGGGAGACCTACCACTCCGTCGTCCTCCTCCACCGCGTCGAGGCCGTCGCCGAAGGCGTCCCTCTCTCCGGTGCCTATCGCCTCCGCGTCTGACGTCAGCAAGGCAAAGGAGAATGTCACCGTCACAGTCCGGTTCCGACCCCTCAGTGGgagagaaattaataaaggGGACGAGGTGGCGTGGTATGCGGATGGGGATCATATAGTGAGAAATGAGTACAACCCTTCCCTTGCTTATGGCTTTGATAAGGTATTTGGGCCTGCAACAACAACTCGACATGTTTATGATGTGGCTGCTCAGCATGTTGTCAGTGGTGCTATGGAAGGGATTAATGGTACTGTTTTTGCGTATGGTGTTACTAGTAGTGGAAAGACTCATACCATGCATGGGGAGCAAAAATCACCTGGAGTTATCCCACTTGCAGTGAAGGATGTCTTTGGTATTATACAGGAGACTCCTGGACGAGAATTCTTACTACGTGTCTCATATCTTGAGATTTACAATGAGGTCATTAACGACTTACTAGATCCAACTGGGCAGAATCTAAGAATACGAGAGGATGCTcagGGTACTTATGTTGAAGGAATCAAAGAGGAAGTTGTGCTATCCCCTGCTCATGCCCTTTCTTTGATTGCTACAGGAGAAGAGCATAGACATGTGGGTTCAAATAATTTCAATCTAGTTAGCAGTCGAAGCCACACTATTTTCACCTTGACTATTGAAAGCAGTTCGCGAGGGGAAAATATAGGGGAAGAGGATGTGACATTGTCCCACTTGCACTTAATTGATCTTGCAGGGTCTGAAAGTTCTAAAACCGAAACAACTGGTTTGAGGAGGAAAGAAGGTTCCTATATTAATAAAAGCTTGCTTACTCTTGGAACGGTGATTGCTAAATTAACAGATGGAAAGGCAACTCATATTCCTTATCGAGATTCAAAGCTCACTCGGTTGTTACAATCATCCCTTAGTGGCCATGGACGGATTTCTCTCGTTTGCACAGTTACTCCTGCTTCTAGCAGTAGTGAAGAGACACACAACACGTTAAAATTTGCACACCGGAGTAAGCATGTTGAAATCAAAGCTTCTCAAAATAAGATTATGGATGAGAAGTCTCTGATCAAGAAGTATCAGAGGGAAATTTCTGAGTTAAAGCAGGAGCTTCAGCAGTTGAAGCGTGGCATGGTTGAGAATCCCAATGTGGCCACATCTTCACAAGAAGATCTGGTTACTTTGAAGCTTCAGCTCGAAGCTGGCCAATCCAAATTGAAGTCGAGATTGGAAGAGGAGGAACAATCTAAAGCAGCTTTGATGGGAAGAATTCAACGACTAACCAAATTAATCTTAGTTTCTACAAAGAATGCAATGTCATCAAGCATTCCAGAAAGGCCTAGCAATAGGCGAAGGCATTCTTTTGGGGAAGATGAGCTTGCATATTTACCAGATAGAAAACGCGAGTCCTGGATTAATGATGACGCAGGGAGCCATGCTTCAGTTCTTTCAGCAGAAGAAAAGGATGATGTTACCAATTTAGATGAATTGGGGAAGGATTATAAAAGGAGCAAAAGGCGTGGAATGCTTGGTTGGTTGAAGCTAAGAAAACCTGATACTGTTGATGGATTATCGCCAAATTTTGATAGTGAGGCCTCTGCAAATGGGTCACCTGCATCTGCTTCAAAATTAACTCCAAACAGAGTTATGCTTTATGACATGAAAGATTCACGCAGGAATTCAGTCAGCAGAAAGGAGAATGCTTCAGCCCTCAATTCTTTTCCAGGAAGAACTCAAGCAGGTGACTTGTTCGGTGTAACTGTTGGAGGCCATCAACTTCCTCCGACCGGGACTACTGTCACAGATCAAATGGATCTTCTGCGGGAACAAGTAAAAATGTTGGCTGGAGAGGTGGCATTATGTATTAGTTCTCTGAAAAGACTGTCTGAACAAGCAGCTAACAAGCCTGAAGATATCCAACTACAAGAGGACATGCATAAGTTGAAGGGTGAAATTAGCCAAAAGAAGAATCAAATCCGTATCCTAGAGCAACGGATGATTGGATCACTGGGACATGCACCAAGTAACAGCGAAATGTCTCAGGCTCTATCCAAGCTTACCACTGAGCTCAATGAAAAATTTTTGAACTTGAGATCAAGTCTGCAGATAACAGGATACTTCAAGAGCAACTGCAGTTGA 2412 0.4498 MGIFLEGEDRVQTPKSALPWPARDPSLTQTLSETFHLSSLSPSMSSAAGYTRSSQRASVSPLRSRKSPAGATKPAGRPTTPSSSSTASRPSPKASLSPVPIASASDVSKAKENVTVTVRFRPLSGREINKGDEVAWYADGDHIVRNEYNPSLAYGFDKVFGPATTTRHVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGEQKSPGVIPLAVKDVFGIIQETPGREFLLRVSYLEIYNEVINDLLDPTGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIATGEEHRHVGSNNFNLVSSRSHTIFTLTIESSSRGENIGEEDVTLSHLHLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIAKLTDGKATHIPYRDSKLTRLLQSSLSGHGRISLVCTVTPASSSSEETHNTLKFAHRSKHVEIKASQNKIMDEKSLIKKYQREISELKQELQQLKRGMVENPNVATSSQEDLVTLKLQLEAGQSKLKSRLEEEEQSKAALMGRIQRLTKLILVSTKNAMSSSIPERPSNRRRHSFGEDELAYLPDRKRESWINDDAGSHASVLSAEEKDDVTNLDELGKDYKRSKRRGMLGWLKLRKPDTVDGLSPNFDSEASANGSPASASKLTPNRVMLYDMKDSRRNSVSRKENASALNSFPGRTQAGDLFGVTVGGHQLPPTGTTVTDQMDLLREQVKMLAGEVALCISSLKRLSEQAANKPEDIQLQEDMHKLKGEISQKKNQIRILEQRMIGSLGHAPSNSEMSQALSKLTTELNEKFLNLRSSLQITGYFKSNCS 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2299 803 CDD KISc_CENP_E 113 432 - -
Ssu6g2299 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 467 IPR027417 -
Ssu6g2299 803 MobiDBLite consensus disorder prediction 617 634 - -
Ssu6g2299 803 ProSitePatterns Kinesin motor domain signature. 332 343 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu6g2299 803 ProSiteProfiles Kinesin motor domain profile. 113 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2299 803 Coils Coil 736 756 - -
Ssu6g2299 803 Coils Coil 501 521 - -
Ssu6g2299 803 SMART kinesin_4 111 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2299 803 MobiDBLite consensus disorder prediction 23 62 - -
Ssu6g2299 803 PANTHER KINESIN-LIKE PROTEIN KIN-7C, MITOCHONDRIAL 98 788 - -
Ssu6g2299 803 PRINTS Kinesin heavy chain signature 333 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2299 803 PRINTS Kinesin heavy chain signature 298 315 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2299 803 PRINTS Kinesin heavy chain signature 184 205 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2299 803 PRINTS Kinesin heavy chain signature 382 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2299 803 MobiDBLite consensus disorder prediction 76 93 - -
Ssu6g2299 803 Gene3D Kinesin motor domain 103 464 IPR036961 -
Ssu6g2299 803 MobiDBLite consensus disorder prediction 1 108 - -
Ssu6g2299 803 Pfam Kinesin motor domain 119 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g2299 803 PANTHER CENTROMERE PROTEIN E 98 788 - -
Ssu6g2299 803 Coils Coil 434 468 - -
Ssu6g2299 803 MobiDBLite consensus disorder prediction 615 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2299 Ssu-Chr6 52134474 52158747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2299 93 758 Miscellaneous Gene Families AT5G06670 58.580 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2299 K11498 - gmx:100817131 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2299 6 52134474 52158747 Ssu6g2299 6 52134474 52158747 ECH