Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2286 ATGATTGAGAACGGTGGTAGCAAGAGCCATCAACCGGCTTTTGAAGTCTCCAGTGACATGCTTCCACAAGTAGGTTCCAAGTGCTTTGATGATGATGGCCGTCTCAAAAGAACTGGAACTATTTGGACTGCAAGTGCTCACATAATAACTGCTGTTATTGGTTCTGGGGTGCTATCTTTGGCATGGGCTATTGCTCAGCTTGGTTGGGTTGCTGGTCCTGCTGTGATGGTTCTCTTCTCTATTGTGACTTATTACACCTCAACTCTTCTAGCTGTTTGTTACCGAACTGGTGACCAACTCAGTGGCAAGAGAAACTACACTTACACTCAAGCTGTTAGATCCTACCTTGGCGGTGTTAAGGTCATGCTTTGTGGGTCGGTTCAGTATGTGAACCTTTTTGGAGTGGCAATTGGGTACACCATAGCAGCTTCCATAAGCATGATGGCAGTCAAGAGGTCTAATTGTTTTCATAGTAGCGGAGGAAAAAATCCATGCAAAATGAACAGCAATGTTTACATGATTTCATTTGGTATTGTGGAAATTATTTTCTCCCAAATTCCAGACTTCCATGAGTTATGGTGGCTCTCTATTGTAGCTGCTGTCATGTCCTTCACATACTCAATAATTGGACTAGGCCTTGGTATTGGTAAAGTTATAGGAAACGGAGGAGTAAAAGGAAGCCTAACTGGTGTAAGTGTTGGTACTGTGACAGAAAGCCAAAAAATTTGGAGGAGCTTCCAAGCTCTTGGTAACATAGCCTTTGCCTACTCCTACTCAATGATCCTTATAGAAATTCAGGACACAATCAAATCCCCTCCAGCAGAGTCAAAGACAATGTCCAAGGCTACTTTAATCAGTGTTTTAGTCACAACCGTTTTCTATATGCTATGTGGTTGCTTTGGCTATGCTTCTTTTGGAGACTCAAGCCCTGGAAACCTTCTCACTGGTTTTGGCTTCTATAACCCATATTGGCTCCTTGACATAGCCAATGTTGCCATTGTTGTCCACCTTGTTGGTGCATACCAAGTTTACTGCCAACCCCTGTTCTCATTTGTTGAAAAGATCACAGCAGAAAAGTTCCCAAATAGTGATTTTGTGAACAAAGACATTGAAGTACCAATCCCTGGTTACAAACCCTACAAGCTCAACCTCTTCAGATTGGTTTGGAGGACAATTTTTGTGATCATATCTACCTTGATGGCCATGCTCCTACCATTCTTCAATGACATGGTGGGGCTTATTGGAGCCATTGGATTTTGGCCCCTCACTGTATATTTCCCAGTCGAGATGTATATAgctcaaaaaaaaataccaaagtGGAACCTAAGATGGATATGCCTACAGACGCTCAATGTTGCATGCCTCATAATTACTTTAGTAGCAGCAGCAGGTTCCATTGCTGGGGTTATTGATGATCTTAAAGTTTACAAGCCATTCCACACAAGCTACTAA 1452 0.4201 MIENGGSKSHQPAFEVSSDMLPQVGSKCFDDDGRLKRTGTIWTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVMVLFSIVTYYTSTLLAVCYRTGDQLSGKRNYTYTQAVRSYLGGVKVMLCGSVQYVNLFGVAIGYTIAASISMMAVKRSNCFHSSGGKNPCKMNSNVYMISFGIVEIIFSQIPDFHELWWLSIVAAVMSFTYSIIGLGLGIGKVIGNGGVKGSLTGVSVGTVTESQKIWRSFQALGNIAFAYSYSMILIEIQDTIKSPPAESKTMSKATLISVLVTTVFYMLCGCFGYASFGDSSPGNLLTGFGFYNPYWLLDIANVAIVVHLVGAYQVYCQPLFSFVEKITAEKFPNSDFVNKDIEVPIPGYKPYKLNLFRLVWRTIFVIISTLMAMLLPFFNDMVGLIGAIGFWPLTVYFPVEMYIAQKKIPKWNLRWICLQTLNVACLIITLVAAAGSIAGVIDDLKVYKPFHTSY 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2286 483 Pfam Transmembrane amino acid transporter protein 37 470 IPR013057 -
Ssu6g2286 483 PANTHER OS05G0424000 PROTEIN-RELATED 9 477 - -
Ssu6g2286 483 PANTHER AMINO ACID CARRIER 9 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2286 Ssu-Chr6 51431776 51433808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2286 8 483 Organic Solute Cotransporters AT1G77380 73.950 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2286 K24917 - gmx:100796082 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2286 6 51431776 51433808 Ssu6g2286 6 51431776 51433808 ECH