Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2274 ATGGCGGAGGAGACCGCTCCTCTCGGCGGCGGCGATTCGTCGTCGGCGGCGAGGGCTCCGTCGTCGTTCGTGAAGAAAGGCGACCGGCAAATGTTCACGGTGGAGCTCCGGCCAGGCGAGACCACCATAGTGTCGTGGAAGAAGCTTATGAAGGACGCCAACAAGGTTAACAATAACGGATCCGCTTCCGCACCCAAACAACACCACTCCAATGCGAACCCTGCGCTCGAGTCCAGAATCGCTCCGGGTCAACCTAAGGAGATTGAAGAACAGGGTGCTCCTCAGACAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACATGGGTAAGGACACTAGTGACGAGGAGGATCTACTTGATGTTCCTGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCTGAATTGCTGTTCTTTCTGCAGGATGAGTATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGATTCTTTGTAAATAGGGGGAAATTGGAACGCATAAATGAACCTCCAGTATTACCTACCCAGCAAGCAAAGAAAAGGCGTCGAAAAGATATAGTGCAGAATCCTGGTGAAAATATTGATggtcatgtattaaataaacatgtgaAAGTGGGCAATACTGCTACTGGAAAGACTGCATCATTACCTGTGAAAAATACAATTAGTTCCTCGCATAATTTGGGTGTACCTGGCGAACATGACGAAGACATGAGATTTCGGAATCAATTGGATGTCTCTAGAATtagtttgaaaaagaaaactgCTGACACTAGACCAATGTTGGATCCTCCTGTCTGTTCGAAAGTATCAACTGATGATGCTCCTACTGCTGCAGAAGATGCTGATAAACAGAAGACCGGAGTACTTCAATCTAAGAACATAAGTGATAAATATAAAGATGCAAGTGGATTGCTTGATACTTCTCATCAGAAGTGTCCTGAAAAAAGTGCATCTGCACATTCCAAATCCCAGCCTGGAAAAACCTCAAGTAGTGTTgacaattttgaaaacattggtcggtcaaaagataaaaatggtaTCCGTGAACTGCCAGATCTTAACTTGTCTCTGGGAAAATCTGCTATACGAGCACCAAAATCTGAAAATGTGCTCAAGAAAGATGGTTCTAGTACTAGGCCAAAAACTACAATGCTTGAGAAAGCTATTCGAGAGTTGGAGAAGATGGTTGCAGAATcAAGGCCACCAACTATGGAAAACCAGGAGGCAGATACCACACCTCAGGCTGTGAAACGGAGATTACCTAGAGAAATAAAGCAAAAACTTGCTAAAGTTGCTAGATTAGCGCAGGCAAGCCAAGGGAAAGTATCAAAGGAGTTAATTAACCGTCTTATGAGTATTCTTGGGCATCTGATTCAGCTCAGAACACTAAAGcgaaacttaaaaattatgatcagTATGGGTTTGTCTGCGAAGCAGGAGAAAGATGATAGGTTTCAACAGATAAAGAAGGAAGTTATTGAGATGATTAAGATGCAGGTCCCATCTATGGAATCCAAGCTACAGCAGCAAGCTGGAGCATCTGGGGAACAAGAATTAGGTCCTGATGGAAAAGCAATAACTAAAAGGAATTTTAGTATGGACACTACGTTGGAAGACAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGGTTAGATGAAAATTCTGGTCCGCAAATCAGAAAGTTGTATACTGAGCTTGCGGAATTATGGCCAAATGGTTACATGGACAACCATGGGATCAAGCGTGCAATTTGCAGGTCAAAAGAGAGGCGCAGAGCACTGTACAGCAAACATAAGGATCGGGAGAAAATTAAGAGGAAAAAGTTATTAGCACCTCAACAAGAGGAGAATGTTCAATTTAATGCTAGTCCAATTACTTTGCAACAGCACATGCGAGAGAGATTAGCTACAGACTCTAGCAGTCATCCTCATGCTTCAGTAAACAAGGCAGTTTCTAATACAGTTACCGCTGCACGGGCTCTCAATCCTTCTGTGAATGGTCCAAAACAAGAAAAGGCAAAGGGAAGTTCAAGTGGCTCCCTGGATGATGTCAGAGGTGCAGATGGTGTTTTAATAAAGAAGGTAAAGAGAAGGCCAGAACAGGGTTTGGAAGGAACTCATTTTCGCCCTGAGAGGATAGCTTCTTTGCAAGGAGAAGAAAGGCCAAGGTCCCTAAAGCAGTCTGCAGGCGTTCCCCCCAAATCAAACCTTCAGCCAACTTCTCTCCCTGGTCTTGAGCAGTCAAGCTAA 2271 0.4201 MAEETAPLGGGDSSSAARAPSSFVKKGDRQMFTVELRPGETTIVSWKKLMKDANKVNNNGSASAPKQHHSNANPALESRIAPGQPKEIEEQGAPQTNRFSAVIEKIERLYMGKDTSDEEDLLDVPDDQYDTEDSFIDDAELLFFLQDEYFEVDNSAIKHDGFFVNRGKLERINEPPVLPTQQAKKRRRKDIVQNPGENIDGHVLNKHVKVGNTATGKTASLPVKNTISSSHNLGVPGEHDEDMRFRNQLDVSRISLKKKTADTRPMLDPPVCSKVSTDDAPTAAEDADKQKTGVLQSKNISDKYKDASGLLDTSHQKCPEKSASAHSKSQPGKTSSSVDNFENIGRSKDKNGIRELPDLNLSLGKSAIRAPKSENVLKKDGSSTRPKTTMLEKAIRELEKMVAESRPPTMENQEADTTPQAVKRRLPREIKQKLAKVARLAQASQGKVSKELINRLMSILGHLIQLRTLKRNLKIMISMGLSAKQEKDDRFQQIKKEVIEMIKMQVPSMESKLQQQAGASGEQELGPDGKAITKRNFSMDTTLEDKICDLYDLFVDGLDENSGPQIRKLYTELAELWPNGYMDNHGIKRAICRSKERRRALYSKHKDREKIKRKKLLAPQQEENVQFNASPITLQQHMRERLATDSSSHPHASVNKAVSNTVTAARALNPSVNGPKQEKAKGSSSGSLDDVRGADGVLIKKVKRRPEQGLEGTHFRPERIASLQGEERPRSLKQSAGVPPKSNLQPTSLPGLEQSS 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2274 756 MobiDBLite consensus disorder prediction 315 342 - -
Ssu6g2274 756 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 17 756 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 1 30 - -
Ssu6g2274 756 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 17 756 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 180 201 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 312 357 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 667 756 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 256 300 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 694 726 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 54 74 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 667 684 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 224 243 - -
Ssu6g2274 756 Pfam HPC2 and ubinuclein domain 126 170 IPR014840 -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 54 78 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 511 532 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 181 195 - -
Ssu6g2274 756 MobiDBLite consensus disorder prediction 736 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2274 Ssu-Chr6 51139275 51154969 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2274 - - gmx:100799794 1268.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2274 6 51139275 51154969 Ssu6g2274 6 51139275 51154969 ECH