Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2262 ATGAAGTCCCTAACCACGCTCTGGCCTATGGACATCCTCAAAACCTCTTCCTCTGTTAGAATCACCGCCCTCGCACTCTTCTCCCTCaccctctttctcttcctcttcacGCGTTTCTCTCCCACCACTTATTCTCCCCTCACCTTCTTCTCCGCCACCTCCTCCGCCGCCGAGCCTTCGCCGCAGCAACCACCACCCTCTCCGCCTCCTCCGCCGGGAGGGAAAATATTCCGTGTGCCTCTGTTACCGCCGGTGGAGCGGATGGGCGTGCTGGACGGGAACGGCGTGATGACGGAGGATTTTAGGGTCGGCGAGTTGGATTCAGGTTTCGAGGAGGATTCGTTAAACGGCAGCGTTTCGTTAAATGGTAGCGTTTCGTTAAACGGTGGCGTTTCGCGAGGGGTGAAGGAGGGTGGTGGTGTGAGAGAGAAGGTGGAGAAGTACAAGGTGTGTGATGTGAGAAAGGTGGATTATGTGCCTTGTTTGGATAACGAGGAAGCGATGGAGAGGCTGAAAGGGAGCGTGAGAGGAGAAAAGTACGAGCGCCATTGCCCGGAGATGGGCCTGGACTGTTTGGTGCCGCCGCCTAAGGGGTACCGGAGGCCCATTCTCTGGCCCAGAAGCAGAGACGAGGTTTGGTTCAGTAATGTACCCCATACACGTTTGGTTGAGGATAAAGGTGGCCAAAATTGGATATCGATAAAGAAGGATAAATTTGTCTTTCCTGGTGGTGGAACTCAATTTATACATGGTGcagataaatacctggatcagATTTCTGAGATGGTTCCTGACATTGAATTTGGTCACAATATCAGAGTTGCTTTAGACATTGGCTGTGGAGTGGCAAGTTTTGGTGCCTTTTTGATGCAACGTAATGTGACCACTCTTTCAATAGCACCAAAAGATGTTCATGAAAATCAGATTCAGTTTGCTCTTGAGCGTGGTGTGCCTGCCATGGTATCAGTATTTGCTACACACCGTTTGTTATTACCAAGCCAGGCATTTGACCTGATCCATTGTTCAAGGTGCAGAATTAATTGGACTCGTGATGATGGAATTTTGCTTCTTGAGGCCAACAGGCTCCTGAGGGTTGGTGGCTACTTTGTCTGGGCAGCACAGCCTGTTTACAAACATGAAGAGAACCTTCAAGAACAATGGAAAGAAATGGAGAACCTGACAGCTCACATTTGTTGGGAACTTGTACGGAAGGAGGGTTATATTGCTATATGGCGTAAGCCTATTGACAATAGCTGCTACCTTAGTCGTGACATTGCTGTGCATCCTCCATTATGTGAGTCCAATGATGATCCAGATAATGTCTGGTATGTTGGTCTCAAGGCTTGCATCACTCAAGTACCTAGTAATGGATATGGAGCAAATGTTACAAAGTGGCCTTTGCGCCTTCATCAACCACCAGACAGGCTCCGTAGCATCCAATTGGATGCCATTATATCCAGAGATGAACTCTTTAAGGCTGACTCAAAATATTGGTATGAAATAATAGAAAGTTATGTTCGGGCTTTCCGATGGCAGGAGTACAACCTGAGAAATGTAATGGACATGAGGGCAGGATTTGGAGGGTACGGCAGTATTACATTTCTTGCTTTCTTTTCCTGTTTTTTATTACGTTTGTCAGTTGTTAGGTTTCTGTAG 1656 0.4668 MKSLTTLWPMDILKTSSSVRITALALFSLTLFLFLFTRFSPTTYSPLTFFSATSSAAEPSPQQPPPSPPPPPGGKIFRVPLLPPVERMGVLDGNGVMTEDFRVGELDSGFEEDSLNGSVSLNGSVSLNGGVSRGVKEGGGVREKVEKYKVCDVRKVDYVPCLDNEEAMERLKGSVRGEKYERHCPEMGLDCLVPPPKGYRRPILWPRSRDEVWFSNVPHTRLVEDKGGQNWISIKKDKFVFPGGGTQFIHGADKYLDQISEMVPDIEFGHNIRVALDIGCGVASFGAFLMQRNVTTLSIAPKDVHENQIQFALERGVPAMVSVFATHRLLLPSQAFDLIHCSRCRINWTRDDGILLLEANRLLRVGGYFVWAAQPVYKHEENLQEQWKEMENLTAHICWELVRKEGYIAIWRKPIDNSCYLSRDIAVHPPLCESNDDPDNVWYVGLKACITQVPSNGYGANVTKWPLRLHQPPDRLRSIQLDAIISRDELFKADSKYWYEIIESYVRAFRWQEYNLRNVMDMRAGFGGYGSITFLAFFSCFLLRLSVVRFL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2262 551 PANTHER METHYLTRANSFERASE PMT12-RELATED 63 543 - -
Ssu6g2262 551 MobiDBLite consensus disorder prediction 54 76 - -
Ssu6g2262 551 Gene3D Vaccinia Virus protein VP39 253 413 IPR029063 -
Ssu6g2262 551 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 157 530 IPR004159 GO:0008168
Ssu6g2262 551 CDD AdoMet_MTases 276 370 - -
Ssu6g2262 551 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 63 543 IPR004159 GO:0008168
Ssu6g2262 551 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 181 407 IPR029063 -
Ssu6g2262 551 MobiDBLite consensus disorder prediction 59 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2262 Ssu-Chr6 50643794 50647997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2262 - - gmx:100809916 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2262 6 50643794 50647997 Ssu6g2262 6 50643794 50647997 ECH