Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1695 ATGGAGGGTCTGATCAAGGGCTTGGTCGACGTTGCTCTCGGTGCCGATCGGGAAGAAGAACGGGGTGAACGCTCCTGGGCCGACCTCGTCTCCGGCGATCAGGATCAGGATcatcctcctcttcctcctcctcctcatcaGCAGCAACACTGGTCCAACACACCCCACAAGgAGGAACAGTGGCAAGAGGATAGTCACAGTTACAGGGCTTCCAACAGGCCTCATCAGCTGAATGAACAATATCGTCCTCAGTACGAGGAATCCCAATCTGAAAGGTTCAACACTTCCAAGACACCCCACAAGcTGGATGAAGATCAAGATGGATGGCAGACTGTTGGCAAACCTTCGAGGCAGACACACAagGTTCCAAAGGAAAACTGGCACAGCTATAAACTACCTTCTGATGAGCAAGAATACTCTAATGACGTTGAAGTTCGTGCTGCTGTGGAACCCTCAGAAGATGAACTTGCTGATCTGTCAAGAGCTTGTGACAAACTCTGGGATCTTGATTTAAATCGTTTGACACCTGGCAAAGACTATGAAATTGACTGTGGTGAAGGGAAAAAGGCTTACCAAAAGGAAGATATGGCACAGGGGAGCTTGTTTACTTGGGTTAGTGATGATGTATTCAGAAAGCCTACTCTTGCTcgttttctttcacttttagaTAATTACAATCCACATCAAGGATGTAAGGAAGTAGTCACATCTGAAGAGAGACAAGAACAGGCTTCTTTCATAGAAGAAATCAGTAGAACAGCGCCAATTAAATATCTTCACAAGTATCTTGCATCCAAGGGAATTGCATCAGGGAGTTACCAAGATTTCAAAAGAATGATGACCGATCTGTGGTTTGACCTTTATGGCCGTGGTGGCACATCTGGTTCCTCTTCTGCTTttgaacatgtttttgttgGAGAAATCAAACAAAGTGGAGAAGTTTCTGGCTTTCATAACTGGCTGCAGTTTTACCTTGAAGAAGAGAAGGGAAGAGTTGATTATCAAGGCTATATTTTCCCCCATCGACGGGGACAAATTCCTGACTCTGAAACCCAGCTTCTGACCATTCAGTTTGAATGGAATGGTGTTCTGAAATCTGTATCAAGCACTTTGGTTGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTCTATGTTGGCGGGGAGGATAACCACATTCAGCTTGGCCCATATGCAGTTAATATCAAGTGCTATCGTTTAGGCAATCGAATTGGATCTATTTTCCCCATTGCAGATTCTTGA 1272 0.4253 MEGLIKGLVDVALGADREEERGERSWADLVSGDQDQDHPPLPPPPHQQQHWSNTPHKEEQWQEDSHSYRASNRPHQLNEQYRPQYEESQSERFNTSKTPHKLDEDQDGWQTVGKPSRQTHKVPKENWHSYKLPSDEQEYSNDVEVRAAVEPSEDELADLSRACDKLWDLDLNRLTPGKDYEIDCGEGKKAYQKEDMAQGSLFTWVSDDVFRKPTLARFLSLLDNYNPHQGCKEVVTSEERQEQASFIEEISRTAPIKYLHKYLASKGIASGSYQDFKRMMTDLWFDLYGRGGTSGSSSAFEHVFVGEIKQSGEVSGFHNWLQFYLEEEKGRVDYQGYIFPHRRGQIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYVGGEDNHIQLGPYAVNIKCYRLGNRIGSIFPIADS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1695 423 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 155 423 IPR018998 GO:0004521
Ssu6g1695 423 Pfam Endoribonuclease XendoU 158 419 IPR018998 GO:0004521
Ssu6g1695 423 MobiDBLite consensus disorder prediction 1 127 - -
Ssu6g1695 423 PANTHER - 66 422 - -
Ssu6g1695 423 PANTHER PLACENTAL PROTEIN 11-RELATED 66 422 IPR039787 GO:0004521
Ssu6g1695 423 MobiDBLite consensus disorder prediction 71 92 - -
Ssu6g1695 423 MobiDBLite consensus disorder prediction 93 110 - -
Ssu6g1695 423 MobiDBLite consensus disorder prediction 52 70 - -
Ssu6g1695 423 MobiDBLite consensus disorder prediction 12 31 - -
Ssu6g1695 423 CDD XendoU 155 419 IPR018998 GO:0004521
Ssu6g1695 423 SUPERFAMILY EndoU-like 157 421 IPR037227 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1695 K14648 - gmx:100813919 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1695 6 28499448 28504035 Ssu6g1695 6 28499448 28504035 ECH