Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1620 ATGGCCGACTCCTCTCAAGACCTGGACCAACTCCTCGACAGTGCTTTGGATGATTTCCAGTCCTTCAACCTTAATCCTTCCCTTCCaagTGGGGAAGCAACTGCGAGCAAGAAGGAGAGTCCTTCTCTGCTGTCGGGGGTTCAAGGATTGGGCATGGGCCTACCTGATTTGGGAAccaagaaaaaggggaaacagAAGGCTTCCAAAGATAGCCGCGTGTCGGAGGCGCTCAACAGGCTGAGGGAGCAGACCAGAGAGGCTGTAAAGGGCCTCGAGTCTGCGTCCCCACCCGCTGCCGATGATTTCGGGAAGGATGCCATGATGGAAGATTGGGTCAAACAGTTTGAGCAGCTTGCTGGCTCTCAggacATGGAATCTATTGTGGAGACCATGATGCAGCAACTTCTATCCAAGGACATTCTTCATGAACCCATGAAGGAAATAGCTGAAAAATATCCTAAGTGGTTGGAAGAGCACAAAACCAGCTTAAGCAAAGAAGAATATGAACGCTATTCACACCAATATGAACTGATACGAAATCTTAATGAAGTTTATGAAAATGATCCTGGAAACTTCAACAAGATTGTTGAGCTCATGCAGAAAATGCAAGAATGTGGACAACCACCAAATGATATTGTCCTGGAGCTTGCTCCCGATTTCGATTTAGCCAGTCTTGGCCAGTTATCTCCAGAGATGCTTGACTCTCAGccaaattgttgtataatgtGA 729 0.4472 MADSSQDLDQLLDSALDDFQSFNLNPSLPSGEATASKKESPSLLSGVQGLGMGLPDLGTKKKGKQKASKDSRVSEALNRLREQTREAVKGLESASPPAADDFGKDAMMEDWVKQFEQLAGSQDMESIVETMMQQLLSKDILHEPMKEIAEKYPKWLEEHKTSLSKEEYERYSHQYELIRNLNEVYENDPGNFNKIVELMQKMQECGQPPNDIVLELAPDFDLASLGQLSPEMLDSQPNCCIM 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1620 242 Gene3D Pex19, mPTS binding domain 112 225 IPR038322 -
Ssu6g1620 242 Pfam Pex19 protein family 15 242 IPR006708 GO:0005777
Ssu6g1620 242 Coils Coil 74 94 - -
Ssu6g1620 242 MobiDBLite consensus disorder prediction 20 43 - -
Ssu6g1620 242 MobiDBLite consensus disorder prediction 20 75 - -
Ssu6g1620 242 MobiDBLite consensus disorder prediction 59 75 - -
Ssu6g1620 242 PANTHER PEROXISOME BIOGENESIS PROTEIN 19-1 2 242 - -
Ssu6g1620 242 PANTHER PEROXISOMAL BIOGENESIS FACTOR 19 2 242 IPR006708 GO:0005777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1620 K13337 - gmx:100527390 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1620 6 26955255 26959735 Ssu6g1620 6 26955255 26959735 ECH