Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1609 ATGGCAATAGTCGGTTGCAGCAGTGATGGATACATGGATGTCACCAAGTTCAACAAACCGATGCCGTGGATCGGCATATACATAGTAGCAGCATCTCTTGCCTGTCTCATAGCATTGGCCGCAGATCTCATACACGGAATTCGTGGTCGCAAACTTTGGTTCCCTTGCAAATTCTTCTGCCTAAACGCCACTTCCTTGGCCTTAATAGCTGTTGCAGTGAAGTTATCAGTGGATCTCAACACCCCCATGCCTCACCGCCACGATCAGCTATCAAAACTCAGCAGCAGCGCCATGATCTGCACAATAATGGCCAATTCCATGCCCACTCTTGGTATCACCGAGAACAAAGACACCATGATGAACCTCATGGCCGTGGCCATCCTCGTAGTTACCATGATTGTGAACATCTGCATCCAGTTTGTCACCGGAGTTATCTATGTGTTCTGGGTGGAACATGCTGTCATCATGCTCCTCATGCTCATTTTGTTGATGAACATGGCCTCCTCAGCCATAAGTATTCCAAAGATGAAGCACCATTTCGAGctgaaatataagatgaatgaagagGCACTGAGAGAAAGCTCAAACCAATTTGGGGAGGAAGGGAATCAAATCGTCAGCAGACTCAGAGATCACCTAATGAAAATTTGGATGATGACCCACACCAGCAGCCCCCAATTTGTTCTTGGAAGGTCAGTGACATGTACTGCCTCTGGTGCCTTTTGTCTTCTAAGTACCATGACATTAGTAGAGGCCATGCTTCGATCTTACTTGATGCCATGGTCGTTTAGATTTTGCACTGGTGACTCTGACTACAAGTGGTCCATCATCTTAATTTTCATAGTTCAGGTTGCTGCAGTGGTGGTGGGTACTATTGCCCCTGCTTTTAGATGGTTCATTGCCATAAATTATAGGTGCCCAAGTGTGAGGAATAAGAGCTGCAAGAGAAGGTTCCACGTAGAAGGGTACTGGACCACCAAGCTAGTGTTAATTAAAGAAAGCCCTCTTGGTTTTCGAATTCATAATAGGCACTACAGAAAGCTGGCCCATGATGCAAAACTTCTTCTATTGTCTTTCTGTATTAAACTGCAGGTGGGGATTGTGCTAATGTGTAAAGCCGCCCAATACGTTTCAATATACCTCATGTGCTGGATCATGACATGTTGTGATCATTGCAAGAAGTTGAAAtccaaatttgtttttagtgtCTCAAGCGTTAGCTCGGAAACAGAGTCAAGGCCTGGCCCAAAGCTAGATCTGAGATGTTTTGTTTTGCATCTTGAAGGTGAGGAAGAACTCGTTGAGGTGATGATGAATCAGAATCGTGATGCCACTAATCACTGGGTTCAAGTAGGAGAAAAGAAGCAGCCAAAACTTCTCATTGAGTTATTAGAGGAGAAGTGTTCTTTCTTGCAAGGATTCAAGGGAGTGGGAGCATTTGACAGTGACCAAGTACTTTCTTTACATGCTGGAGAAGCTCCATATAGTTGGTCACTTCCTCTGGTGACACTGGCTAGCATTGTAGTGGCACTGCCAAACATCAATCAGGGTTCAGTCAAAAAATTGCTGAGTACTATAAATGAAGGGCTCCCCTTTGTAAAGTTCATAGAAAAGAACCTGGACAAAGAAGGAGAGTTGTTTAAACTCAGGAAGACAGCAGAAATTGTGTGGCTTGGAGTTGATCTATATGATAAGTGGCTAGATGTGGATCTTCATGAGCTCTCACTTCAAGATAAGAGCCCCAACGAGACACTTGAGAAACTAGCTGATGCTGCAAAAATCAGGTACGAGAAATTTAGAGCCAAATACAACCACATATGCATAAAATTAAGCCCTTCATCATGGCCCATCAAAGTTTCGGCGTCTCACACTATGTACAAACTATGCAAAACTGCTCTCTTAAATCATGAACTCGTAAGAGACAATACGAGTGAGAGATTGTTGGAAGCACTTACAGTGATGATTTCTGATATATTGGGTGCATGCCTCACCAACTTACCCCATGTTATATCCAACAAGTGTTTGAATAGCACCATTGAAGAGAGGGAGGATACTGTCAGACATGCAGTTTACATTCTTGGTAAAACCAAGAAGATTTTAGAAATGCTAGAAAAGAGAGCATTTCCCCGTGTGGATTTCTGCCGAGGAACCTACATTGAAGATTGGCGTTTAATGCATAAGCAAAACAGTTTTTTGCACTTTGTTCCATCTTCACTGGAGAATGACACTCATAAAACTCCCAAATCAAGTGATCTTTACCTAAATATTGACTAA 2274 0.4252 MAIVGCSSDGYMDVTKFNKPMPWIGIYIVAASLACLIALAADLIHGIRGRKLWFPCKFFCLNATSLALIAVAVKLSVDLNTPMPHRHDQLSKLSSSAMICTIMANSMPTLGITENKDTMMNLMAVAILVVTMIVNICIQFVTGVIYVFWVEHAVIMLLMLILLMNMASSAISIPKMKHHFELKYKMNEEALRESSNQFGEEGNQIVSRLRDHLMKIWMMTHTSSPQFVLGRSVTCTASGAFCLLSTMTLVEAMLRSYLMPWSFRFCTGDSDYKWSIILIFIVQVAAVVVGTIAPAFRWFIAINYRCPSVRNKSCKRRFHVEGYWTTKLVLIKESPLGFRIHNRHYRKLAHDAKLLLLSFCIKLQVGIVLMCKAAQYVSIYLMCWIMTCCDHCKKLKSKFVFSVSSVSSETESRPGPKLDLRCFVLHLEGEEELVEVMMNQNRDATNHWVQVGEKKQPKLLIELLEEKCSFLQGFKGVGAFDSDQVLSLHAGEAPYSWSLPLVTLASIVVALPNINQGSVKKLLSTINEGLPFVKFIEKNLDKEGELFKLRKTAEIVWLGVDLYDKWLDVDLHELSLQDKSPNETLEKLADAAKIRYEKFRAKYNHICIKLSPSSWPIKVSASHTMYKLCKTALLNHELVRDNTSERLLEALTVMISDILGACLTNLPHVISNKCLNSTIEEREDTVRHAVYILGKTKKILEMLEKRAFPRVDFCRGTYIEDWRLMHKQNSFLHFVPSSLENDTHKTPKSSDLYLNID 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1609 757 PANTHER PROTEIN, PUTATIVE-RELATED 1 731 - -
Ssu6g1609 757 Coils Coil 582 602 - -
Ssu6g1609 757 PANTHER PROTEIN, PUTATIVE-RELATED 1 731 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1609 - - gmx:100794740 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1609 6 26787886 26790159 Ssu6g1609 6 26787886 26790159 ECH