Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1540 ATGGGAAGCAGCGGAAAAATGGTAGACAAAGAAGAGGTTATCGCAAAACTGAAGGACGATGGCGACTTTGACAGGCTTCGTTTGAAGATCGTTCGCAAGCTCAAGGACAACGAAGAGTTACAACGACATATTGCCTCAATTGTGAAGCAGTCAGTGGCACTCAATCGTGCTGGAGCTGAAAATATGAAACCAAGACAACTTTCTGATGCCATATATGAAGAAGTTGGTGATAAAGTAATGGGCCAGATATCTGATAGTTTATGGCAAATAATTCGATCGAGTGATGGCATGAAAAGTGAAATCATGGAAACAGTGCAATCTGTCTATGATAAACTGGCAAACCTGAAAGGGAAAGATGAGGTTATGTTGTCCACATATGAAGTGATGCCAATTCAGAGACAAGGGGAAACAGCTTCAGCTACTGAGATTGATGATACATTGCATGAAAATGAGCCCGATGAGCCACCAGGTTTCACTCTCTTGCATAATCAGCTGAATAATAACAATCACGAGGACCAGGATAAAGGGAAGGTGCAGGATCAGACACAAGGATTAACTGCAGAGTGGAAGGAAGATTCCCATCCATCACAGGATACACTCGGTGAAGATTATGTTAATAGCAATGCGCCCCCTGGATTTTCAGTGGATGTGGAGCAAAAACCACCTTCTGATTGTAGTGATGAAGACCCTGATGTACCTCCTGGTTTTGGTTGA 714 0.43 MGSSGKMVDKEEVIAKLKDDGDFDRLRLKIVRKLKDNEELQRHIASIVKQSVALNRAGAENMKPRQLSDAIYEEVGDKVMGQISDSLWQIIRSSDGMKSEIMETVQSVYDKLANLKGKDEVMLSTYEVMPIQRQGETASATEIDDTLHENEPDEPPGFTLLHNQLNNNNHEDQDKGKVQDQTQGLTAEWKEDSHPSQDTLGEDYVNSNAPPGFSVDVEQKPPSDCSDEDPDVPPGFG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1540 237 MobiDBLite consensus disorder prediction 164 237 - -
Ssu6g1540 237 PANTHER EXPRESSED PROTEIN 1 237 - -
Ssu6g1540 237 PANTHER ANTIGENIC HEAT-STABLE PROTEIN 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1540 Ssu-Chr6 25306129 25307251 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1540 - - gmx:100784847 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1540 6 25306129 25307251 Ssu6g1540 6 25306129 25307251 ECH