Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1517 ATGGAGATGGATTCCATGGCCGCTTCCATCGGGGTCTCGGTCCCGGTGCTCCGCTTCCTCCTCTGCTTCGCCGCCACCGTCCCCTTCGGCTTCCTCTGCCGCTTCCTCCCCCGCGGCCTCCCCAAACACCTCTACTCCGCCGCCGTCGGCGTCGCCCTCTCCTACCTCTCCTTCGGCTTCTCCTCCAACCTCCACTTCCTCGTCCCCATGCTCCTCGGCTACGCCGCCATGCTCCTCTGTCGCCCCCGATGCGGCATCGTTACCTTCTTCCTCGGATTCGGCTACCTCATTGGCTGTCACGTGTATTACATGAGCGGCGATGCATGGAAGGAAGGTGGCATCGATGCCACTGGGGCCTTAATGGTTTTGACGCTCAAGGTTATCTCGTGCGCGGTTAATTACAATGATGGGTTGCTGAAAGAGGAGGGTTTGCGTGAGGCGCAGAAGAAATACCGCTTGATCAAGTTGCCTTCGCTGATTGAGTACATTGGTTACTGCCTCTGCTGTGGGAGCCACTTTGCTGGTCCTGTTTATGAAATGAAGGATTATCTTGATTGGACTGAAGGAAAAGGGATTTGGAGCTCTGAAGCAAAAGGGTCGCCATCACCATATGGGGCGACGGTCCGGGCTCTTCTCCAGGCGGGTTTTTGCATGGCCATGTATTTAAACCTTGTGCCTCATTTTCCTCTGTCCAAGTTTACTGATCCTTCGTACCAAGAATGGGGTTTCTGGAAAAAATTAAGTTACCAGTATATGGCTGGTTTTACTGCACGCTGGAAGTATTATTTCATATGGTCAATTTCAGAAGCCTCTATTATCATCTCTGGCCTGGGTTTCAGTGGCTGGACCGATTCGTCCCCACCAAAGCCGCGCTGGGACCGGGCCAAAAATGTAGATATATTAGGTGTTGAGTTTGCAAAGAGTGCAGTTGTGATTCCAGCTGTGTGGAATATTCAAGTCAGCACCTGGCTTCGTCATTATGTTTACGAGAGGCTTATTCAGAATGGGAAGAAACCAGGTTTCTTTCAGCTACTTGCCACCCAGACTGTTAGTGCTGTTTGgcatGGCTTATACCCTGGATACATAATATTCTTTGTTCAGTCAGCATTAATGATTGCTGGTTCCAGAGTCATTTACAGATGGCAGCAAGCTGTGCCTCCGACAATGGCTCTGTTTAAGAATGTGTTGGTGTTTATGAATTTTGCTTATACACatttggttctaaattactctTGCGTTGGTTTCATGGTGTTAAGTCTGCATGAAACTCTTGCCTCATATGGAAGTGTGTATTACATTGGAACTATTCTTCCTGTTGTTATGATCCTTCTTGGTAAAGTAATCAAACCGGGAAAGCCTGCCAGATCTAAAGCTCGGAAGGAACAGTGA 1389 0.4881 MEMDSMAASIGVSVPVLRFLLCFAATVPFGFLCRFLPRGLPKHLYSAAVGVALSYLSFGFSSNLHFLVPMLLGYAAMLLCRPRCGIVTFFLGFGYLIGCHVYYMSGDAWKEGGIDATGALMVLTLKVISCAVNYNDGLLKEEGLREAQKKYRLIKLPSLIEYIGYCLCCGSHFAGPVYEMKDYLDWTEGKGIWSSEAKGSPSPYGATVRALLQAGFCMAMYLNLVPHFPLSKFTDPSYQEWGFWKKLSYQYMAGFTARWKYYFIWSISEASIIISGLGFSGWTDSSPPKPRWDRAKNVDILGVEFAKSAVVIPAVWNIQVSTWLRHYVYERLIQNGKKPGFFQLLATQTVSAVWHGLYPGYIIFFVQSALMIAGSRVIYRWQQAVPPTMALFKNVLVFMNFAYTHLVLNYSCVGFMVLSLHETLASYGSVYYIGTILPVVMILLGKVIKPGKPARSKARKEQ 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1517 462 Pfam MBOAT, membrane-bound O-acyltransferase family 102 412 IPR004299 -
Ssu6g1517 462 PANTHER LYSOPHOSPHOLIPID ACYLTRANSFERASE 2-LIKE 2 461 - -
Ssu6g1517 462 PANTHER PORCUPINE 2 461 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1517 K13519 - gmx:100778962 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1517 6 24873909 24877081 Ssu6g1517 6 24873909 24877081 ECH