Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1498 ATGCATATGAAGATGAAGGTAGAAGAGCGCATCAACATGAATCTGGTTCTGGTAGTGGCGTGTTTGGTCCACTTGAACATCGTTTATGGCTTTGCTCACATTCATGGTTTTGGGGAGCAACCACTCTCCAAGATTGCCATCCACAAGGCTGTTGTTTCACTCCACAGTAGCGCTTCCATCACAGCCACCCCTTCTCTTCTCGGCACAAAGGGTGAGGATACCCAATGGGTGACAGTAGATATTGATTACCCTGACCCATCTACAGATGATTGGGTTGGAGTTTTCTCTCCTGCAAAGTTCAATTCATCAACATGTCCACCTGTGAATGATCCAAAAGATCAGACTCCGTACATATGCTCGGCCCCAATTAAGTACAAGTTTTTGAATTACTCCAACTCACACTATACGAAGAAAGGAAAAGCTTCTTTGAAGTTCCAGTTGATCAATCAACGTTCAGATTTCTCCTTTGCACTATTTTCAGGCGGACTATTAAATCCTAAGCTTGTGGCAGTTtccaattttatatcatttgtcAATCCTAAGGTGCCTCTATATCCACGCCTTGCTCAGGGGAAGTCTTGGGATGAAATGACAGTTACCTGGACTAGTGGATATGACATAAACAAAGCTACACCATTTGTTGAGTGGGGTCCAAAGGGTAAAACGCAAGTGCAATCTCCTGCCGGAACATTGACATTTGGTCGTGACAGCATGTGTGGTTCACCTGCACGAACTGTTGGTTGGCGTGACCCTGGTTTCATACACACAAGTTTTCTCAAAAATCTTTGGCCAAATTCAGTgTATACCTATCGACTGGGGCATCTATTGTCTAATGGTTCATATATTTGGAGCAAGAAATATGCATTCAAGTCATCACCTTATCCTGGACAGGACTCACTGCAACGCGTTATCATATTTGGTGACATGGGGAAGGCTGAGCGTGATGGTTCAAATGAGTATAGTGACTTCCAACCTGGTTCACTTAACACTACTGACCAGCTCATCaaggatttagaaaatattgaCATTGTTTTCCACATAGGAGATATAACTTATGCAAACGGATACCTCTCGCAGTGGGACCAATTCACAGCTCAAGTGGAACCAATTGCATCAACAGTGCCATATATGATTGCCAGTGGTAATCATGAACGTGATTGGCCCAACACGGGATCCTTTTATAACACTACAGATTCAGGTGGCGAATGTGGAGTTTTGGCACAGAACATGTTTTTTGTTCCAGCTGAAAACAGAGCAAACTTTTGGTATGCAACGGATTATGGCATGTTTCGCTTCTGCATAGCTGACACTGAACATGATTGGAGAGAAGGATCAGAACAATACAAATTCATTGAGCATTGCCTTGCAACAGTAGACAGACAGAAACAACCCTGGTTGATATTTGCTGCTCATCGTGTGCTCGGATATTCCTCGGATTTTTGGTATGGGCTGGAGGGCTCATTTGAAGAGCCCATGGGAAGGGAAAGTTTGCAGAGACTTTGGCAGAGATATAAAGTAGATATTGCATTTTATGGCCATGTCCATAACTACGAAAGGACATGCCCCATTTATCAGAATCAATGTGTGAATGATGAAAGATCTCACTATTCTGGCGTCGTGAAAGGAACAATTCATGTTGTTGCAGGAGGGGCAGGAAGGCACTTGTCAAATTTCAGCCAAGTAACCCCTAAGTGGAGTCTCTACAGAGACTACGACTTTGGGTTTGTCAAGTTGACAGCATTCAACCATTCATCTCTCTTGTTTGAATACAAGAAAAGCAGTGATGGAAAGGTCTACGATTCTTTTACCATTTCAAGGGATTACAAAGATGTCTTAGCCTGTGTGCATGATGGCTGTGAAGCAACCACTTTAGCAACTTGA 1881 0.4253 MHMKMKVEERINMNLVLVVACLVHLNIVYGFAHIHGFGEQPLSKIAIHKAVVSLHSSASITATPSLLGTKGEDTQWVTVDIDYPDPSTDDWVGVFSPAKFNSSTCPPVNDPKDQTPYICSAPIKYKFLNYSNSHYTKKGKASLKFQLINQRSDFSFALFSGGLLNPKLVAVSNFISFVNPKVPLYPRLAQGKSWDEMTVTWTSGYDINKATPFVEWGPKGKTQVQSPAGTLTFGRDSMCGSPARTVGWRDPGFIHTSFLKNLWPNSVYTYRLGHLLSNGSYIWSKKYAFKSSPYPGQDSLQRVIIFGDMGKAERDGSNEYSDFQPGSLNTTDQLIKDLENIDIVFHIGDITYANGYLSQWDQFTAQVEPIASTVPYMIASGNHERDWPNTGSFYNTTDSGGECGVLAQNMFFVPAENRANFWYATDYGMFRFCIADTEHDWREGSEQYKFIEHCLATVDRQKQPWLIFAAHRVLGYSSDFWYGLEGSFEEPMGRESLQRLWQRYKVDIAFYGHVHNYERTCPIYQNQCVNDERSHYSGVVKGTIHVVAGGAGRHLSNFSQVTPKWSLYRDYDFGFVKLTAFNHSSLLFEYKKSSDGKVYDSFTISRDYKDVLACVHDGCEATTLAT 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1498 626 Pfam Purple acid Phosphatase, N-terminal domain 188 290 IPR015914 GO:0003993|GO:0046872
Ssu6g1498 626 PANTHER PURPLE ACID PHOSPHATASE-RELATED 16 625 - -
Ssu6g1498 626 PANTHER PURPLE ACID PHOSPHATASE 16 625 - -
Ssu6g1498 626 CDD MPP_PAPs 301 606 IPR041792 -
Ssu6g1498 626 Gene3D - 296 610 IPR029052 -
Ssu6g1498 626 SUPERFAMILY Purple acid phosphatase, N-terminal domain 160 293 IPR008963 GO:0003993|GO:0046872
Ssu6g1498 626 Pfam Fn3-like domain from Purple Acid Phosphatase 60 179 IPR040974 -
Ssu6g1498 626 SUPERFAMILY Metallo-dependent phosphatases 301 608 IPR029052 -
Ssu6g1498 626 Pfam Calcineurin-like phosphoesterase 302 517 IPR004843 GO:0016787
Ssu6g1498 626 Pfam Iron/zinc purple acid phosphatase-like protein C 542 601 IPR025733 -
Ssu6g1498 626 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Ssu6g1498 626 Gene3D - 183 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1498 Ssu-Chr6 24609021 24614518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1498 51 604 Miscellaneous Gene Families AT1G13900 31.220 2.51e-67 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1498 K22390 - gmx:100814531 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1498 6 24609021 24614518 Ssu6g1498 6 24609021 24614518 ECH