Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1493 ATGGTAATGGATGCACCGAATCCTTCTTCTTCCGGAGCTTCTCCGTTCCTCGTCAATCTTCCCTCTCGAGGCCTCTTCTCTTCCACCGTCGTCCCTTCCAATCCGGGTGGGATGCGGGTCTATGTATGCGACCATGATACCTCACCACCAGAAGGTCAACATATTAAGACAAACCAACAAAACATACTGATTAGATCACTCACCCTTAAGAAACAAAGGGGTGATTCCACCTCAAAGGATGGATCTGATGGTTCAAGAAAGAGGACTGCTGAAAAGGTTTTGGATAGAGCTTCAGCcaagaaaacaaataatcaaataaactcCCGACAAGAGGGATCAAACAGTCAAACAACTGCTAGGGACTTCCACAACCTGACCGTAGAGAGGCTTCGTGCTCTTTTGAAAGCTAAAGGTCTTTCAACCAAAGGAAAGAAGGAGGAGCTTATTACACGTCTAAAAGATGCAACTGGTTAA 474 0.4388 MVMDAPNPSSSGASPFLVNLPSRGLFSSTVVPSNPGGMRVYVCDHDTSPPEGQHIKTNQQNILIRSLTLKKQRGDSTSKDGSDGSRKRTAEKVLDRASAKKTNNQINSRQEGSNSQTTARDFHNLTVERLRALLKAKGLSTKGKKEELITRLKDATG 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1493 157 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 4 155 IPR033575 GO:0032434
Ssu6g1493 157 MobiDBLite consensus disorder prediction 72 98 - -
Ssu6g1493 157 MobiDBLite consensus disorder prediction 67 122 - -
Ssu6g1493 157 ProSiteProfiles SAP motif profile. 122 156 IPR003034 -
Ssu6g1493 157 MobiDBLite consensus disorder prediction 99 122 - -
Ssu6g1493 157 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 4 155 - -
Ssu6g1493 157 Pfam Det1 complexing ubiquitin ligase 16 72 IPR018276 -
Ssu6g1493 157 Gene3D SAP domain 98 156 IPR036361 -
Ssu6g1493 157 SMART sap_9 122 156 IPR003034 -
Ssu6g1493 157 Pfam SAP domain 123 155 IPR003034 -
Ssu6g1493 157 SUPERFAMILY SAP domain 118 154 IPR036361 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1493 - - gmx:100817629 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1493 6 24557124 24561044 Ssu6g1493 6 24557124 24561044 ECH