Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1491 ATGGCGGATCCAATCCCGGCGCCACCAAGATCCGCCACGGACCTCTTCTCGGATCCGCTCGACGCCCACCCGCTGTGGTTCAAACCGGCGTCGTTCCTCTCCCCGGACTTCGATTCCGAATCCTACATTTCGGAGCTGCGAACCTTCGTCCCCTTCGACACGCTCCGTTCGGAGCTCAACAACTACCTCTCCTCCCTCAACCACGAACTCATCGACCTCATCAACCGCGACTACGCCGATTTCGTCAACCTCAGCACCAAGCTTGTCGACGTGGACGCCGTAGTGGTGCGCATGCGGGCCCCGCTCGTGGAGCTCCGGGAGAAGATCGAGCAGTTCAGAGGATCCGTCCAAGTTTCGCTTGTCGCCATAAAGAACCGCTTGAAGCAGAGATCCGAGGCAGCCTCCGCTAGAGAGACTTTGGAGCTTCTCCTCGATACGTTTCACGTCGTTTCTAAGGTTGAGAAACTAATAAAAGAGCTTCCTAGTGTACCCACCGATTGGTCTAATGGAGATGTAAATTTGTCAGAGAGGAATTCCCTGAGCAATGGAGTTTCTGTGCAGCATGTTGAGGATGAGACAAGTATCAGAGAGACTCAAAGCATGCTGCTGGAAAGAATTGCCAGTGAGATGAACCGACTAAAGTTCTATGTTACACATGCAaagAACCTTCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCTAACAGTAGATGCAAGCTTGGGACATTGCTTTGTTAATGGTTTGGAGCACCGGGATGCAACTGCAATTTATAATTGCTTACGTGCATATGCTGCTATAGATAACACTAAGAATGCAGAAGAAATTTTTCGAATTACTGTTGTGGCTCCGTTGATACAGAAGATCATCCGACATGGATCGTCGGCTGTGGTTGCTGGGTCATCTGGGGATGGTCTTGAAAAtgattatcaactaattaaggAGTGCATTGATAAAGActgtcaatttttattggaaatttCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTCTTAGCCAATTCAATCCTTAAAGAGGTTCTCTCTGCGGTTCAGAAGGGAAAACCAGGTGCATTTTCTCCCGGAAGACCAACAGAGTTCttgaaaaattacaaatcaagCTTAGATTTCTTGGCTTATCTAGAAGGCTACTGTCCATCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATACTGAATTCATGAAGCAATGGAACATTGGAGTATATTTCTCTTTGAGGTTTCAGGAAATAGCAGGTTCTCTCGATTCTGTGCTTACAACATCCAGTCTTGTCCCTGTTCAAAATTCAGATGCTGGTGAAGCAAATTATCAAGGTTTAACATTAAAGCAAAGTGTTACCCTGTTGGAGAGTTTGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAGATTCCTTCGGCTATCCTTGCAGCTTCTTTCTAGATACTCAAATTGGCTGTCATCCGGACTGACTGCTCGCAAAAACCATAACACAAGCACTAGCTCTGGGTGTGAATGGGCTGTTTCAGCTGTCATAGATGACTTCATTTTTGTTGTTCATGATATAAGATATTTGGAGGAGCATGTTCAAGGTGATTACCTACAACATGTGCTTCAGCTTTTGTCTTCATGCTCCCCTGATGTTCTGGAATCAGTAAGGCAGAGCATTTTACTGGGTGGGCAATCATTAAAATCTTTAGAACCTTTAGTAATTAAAGCAGTGGTGGAGTCACTGGTGGAGAAGTCAGTTGAGgaCTTGAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCTCTACCTGTGAGGCATTCACCATATGTTTCAGGGGTATTACGTCCCCTTAAGGCTTTTTGGATGGGGAGAGAGCTACAAGATATTTGGCCAGTGAAACTAGGAATGAAATACTCCTTTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAG 1998 0.4389 MADPIPAPPRSATDLFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAVVVRMRAPLVELREKIEQFRGSVQVSLVAIKNRLKQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPTDWSNGDVNLSERNSLSNGVSVQHVEDETSIRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLTVDASLGHCFVNGLEHRDATAIYNCLRAYAAIDNTKNAEEIFRITVVAPLIQKIIRHGSSAVVAGSSGDGLENDYQLIKECIDKDCQFLLEISSAENSGLHVFDFLANSILKEVLSAVQKGKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRSAVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGSLDSVLTTSSLVPVQNSDAGEANYQGLTLKQSVTLLESLRSCWREDVLVLSCSDRFLRLSLQLLSRYSNWLSSGLTARKNHNTSTSSGCEWAVSAVIDDFIFVVHDIRYLEEHVQGDYLQHVLQLLSSCSPDVLESVRQSILLGGQSLKSLEPLVIKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYVSGVLRPLKAFWMGRELQDIWPVKLGMKYSFVLQLRLLTVIMN 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1491 665 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 7 636 IPR009316 GO:0007030|GO:0015031|GO:0016020
Ssu6g1491 665 Pfam COG (conserved oligomeric Golgi) complex component, COG2 25 156 IPR024602 -
Ssu6g1491 665 PANTHER BNAA01G14200D PROTEIN 7 636 - -
Ssu6g1491 665 Pfam COG complex component, COG2, C-terminal 589 637 IPR024603 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1491 K20289 - gmx:100817096 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1491 6 24478202 24483521 Ssu6g1491 6 24478202 24483521 ECH