Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1482 ATGGCGAACACTAGCTTGGAAGATGTTCCCTCTCTGGATCTCATGACTGAGCTCCTTCGTCGCTTCAAGTGCTCCTCCAAGCCTGACAAGCGTCTCATTCTCATTGGCCCACCTGGATCTGGGAAAGGCACCCAGTCACCAATCGTAAAGGATGAGTACTGCTTATGCCACTTAGCTACTGGTGACATGTTAAGAGCAGCTGTAGCAGCTAAGACCCCTCTTGGTGTCAAGGCTAAAGAAGCTATGGATAAGGGAGAACTTGTTTCGGATGACTTGGTTGTTGGCATTATAGATGAAGCAATGAAGAAACCATCATGTCAGAAAGGTTTCATTCTTGATGGTTTTCCAAGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATGCTGGAAAAACAGGGAGTTAAAGTTGATAAGGTGCTCAATTTCGCAATTGATGATGCAATCCTGGAAGAGCGAATTACTGGTCACTGGATACACCCATCCAGTGGCAGAACCTACCATACAAAATTTGCCCCTCCCAAGGTTCCTGGGGTTGATGATGTTACTGGTGAACCACTTATCCAGCGCAAGGATGACACTGCGGCTGTTCTTAAGTCAAGACTGGAGGCATTTCACAAGCAAACTGAACCGGTTATTGATTACTATTCGAAGAAGGGTATTGTTGCTAATCTTCATGCTGAGAAACCTCCCAAAGAGGTGACAGTCGAAGTCGAGAAAGCGCTGTCTTAA 729 0.4609 MANTSLEDVPSLDLMTELLRRFKCSSKPDKRLILIGPPGSGKGTQSPIVKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKQGVKVDKVLNFAIDDAILEERITGHWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVANLHAEKPPKEVTVEVEKALS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1482 242 PRINTS Adenylate kinase signature 61 75 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu6g1482 242 PRINTS Adenylate kinase signature 110 126 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu6g1482 242 PRINTS Adenylate kinase signature 189 204 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu6g1482 242 PRINTS Adenylate kinase signature 206 220 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu6g1482 242 PRINTS Adenylate kinase signature 33 46 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu6g1482 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 238 IPR027417 -
Ssu6g1482 242 TIGRFAM adk: adenylate kinase 31 241 IPR006259 GO:0004017|GO:0005524|GO:0016776
Ssu6g1482 242 CDD ADK 31 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu6g1482 242 ProSitePatterns Adenylate kinase signature. 110 121 IPR033690 -
Ssu6g1482 242 PANTHER ADENYLATE KINASE 4-LIKE 8 242 - -
Ssu6g1482 242 Gene3D - 2 242 IPR027417 -
Ssu6g1482 242 PANTHER NUCLEOTIDE KINASE 8 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu6g1482 242 Pfam Adenylate kinase 34 219 - -
Ssu6g1482 242 Hamap Adenylate kinase [adk]. 30 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu6g1482 242 Pfam Adenylate kinase, active site lid 157 191 IPR007862 GO:0004017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1482 Ssu-Chr6 24343950 24347848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1482 K00939 - gmx:100790268 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1482 6 24343950 24347848 Ssu6g1482 6 24343950 24347848 ECH