Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1440 ATGGTAGCACGCGGGCTTGTGGTGGTAGCATCACTTCTAATTTGCTGTTTAGCTGAAAGTTGCTATGGGAGTGTTCACTTCTCTTCCCTGAAAAGAACACTTGATGTAACCGCTTCCCCCAAGCAGGGACAAGTTCTGGTGGCTGGATTAGACAAAATCACTGTGACATGGGCTCTGAACAAGACCCTACCAGCTGGGACAGACTCTGGCTACAAAACCGTAAAGCTGAAGCTGTGCTACGCGCCCATTAGCCAACAAGACCGCGCGTGGAGAAAGACGGAGGACGAGCTCTCCAGGGACAAGACCTGCCAGTACAAGATCGTAACCAAACCCTACGACGCTTCCAACAAAACGGTGCAGAGGTTCGAGTGGTTGATTGAGCGAGACGTGCCCAAAGCCACCTACTTTGCACGCGCCTACGCATTTGACTCCAACGACGTGGAAGTGGCTTACGGCCAGACCACGGACGCCAAGAAGGCAGCCAACTTGTTTGAGATCAACGCAATCAGCGGCCGCCACACGTCCCTTGATATCTGCTCCATTTGCTTCAGTGCTTTCTCGGTGGTGTCCCTCTTTGTGTTCTTCTATATCGAGAGGAGAAAGGCAAAGGCTTCTTCCTCACAACAAAAGTGA 633 0.5182 MVARGLVVVASLLICCLAESCYGSVHFSSLKRTLDVTASPKQGQVLVAGLDKITVTWALNKTLPAGTDSGYKTVKLKLCYAPISQQDRAWRKTEDELSRDKTCQYKIVTKPYDASNKTVQRFEWLIERDVPKATYFARAYAFDSNDVEVAYGQTTDAKKAANLFEINAISGRHTSLDICSICFSAFSVVSLFVFFYIERRKAKASSSQQK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1440 210 Pfam High-affinity nitrate transporter accessory, Ig-like domain 27 171 IPR016605 GO:0010167|GO:0015706
Ssu6g1440 210 PIRSF NAR2 2 206 IPR016605 GO:0010167|GO:0015706
Ssu6g1440 210 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 3.2 2 206 - -
Ssu6g1440 210 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 3.2 2 206 IPR016605 GO:0010167|GO:0015706
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1440 Ssu-Chr6 23538108 23539117 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1440 - - gmx:100794996 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1440 6 23538108 23539117 Ssu6g1440 6 23538108 23539117 ECH