Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1439 ATGGAGCGAAGGTTGGGCAGAGAAAGCAAAGGCTCTCTAAGCCTACAAAAAAAGATGGCAGAGACACGGCGTAGGGAAAAACCCGCGCCGGACCTGACCGACTTCATGAACGACATGTTTTTCGGGGCAGTAGATATGGACCACAAAACTTACGACCTCATAGGTGGTAAAAGTGTGGCAGtggacgacgacgacgacgaagGGTTCGACGACAGCACCAGAAGCAACAGTGCAAGGTTGACGCAAGAGTGGTTGCAAGAGGCACGACGAATTGTCGCTTCCTCTCCTTCACGCTGTGACTCTCCTGGTCGCCTTTTAGGGTCCCCAAGGTTCGCAGCGACACAACCAGGCTCACCCCTTCCCTCCTTGGACCGAAGAGAATCTCTCTCTAGAACTAGGTCCGCCCGAAGATTCAGAGCAGGGGAAGGGATCAGTGATGAGATACTGTCGAAAACAGCTACCCACACCCGTAACAAATCCGACACTTTTGCTCAAGCTTCATCAGATGGGGACGGATCCCCTGCAACGGCGGTCCACAAGTGGTTCTCCAACATGCTCAAACCCACCAATAACATTAACACGCAACCACCTCCTTCCCCTCCTGATTCTACCTATTTATCTTCTCTCCCTCCACGTCAACCTCTTCCCCGAAAGTCTCGCTTCCAAACCGAGCCCTCTGCTGCGCCTCACCCGCAGGGGATCCTACCCCCCAATTCAAGGAGAACATTCAAGACATGCACGCCGTCGCCGGAGAATCCTCCGTCGGCTTCTCTTCCTCTGTCGCCGCCGAGGAAACTGGTGGAATCCGCTCACCGGAGGACGATATCTTCTTCCACGTGCTCGCAGGAGAGGATCGCGCCCAAGCATGTTGGTCAAAAAAGAGAGGAAGTGGGCGAAGAGCATAGCCTCAACGGGTTCCTCAGAGAGCAGAGGATTTTGTTCCAGAAAATCTCGAGGGGGGAGCTCCATGCAAATGCGCAAATCGTGCTTTCTGGGCCTTCCAACAGCACGGCGTCGTTGGTGGCTGCCATTTGCCACGCGTGGCTCTTGGGTTATAGGCAGAGAGAGAAGGAGTGTGGAAGCGAGCGCGTGGTGGTGGTGCCTGTCATGAATGTGAAGCGAGGCTCCATGTGGAAGCTCAGGCAGGCTGCGTGGCTCTTTCACCATGCTGGTCTTGATGCCACCGCATTGCTCTTCACTGATGAGGTGAACATGGAAAGGCCTTTGATGACTGGCCAACTGAGCGTCCTCGTGGTTGGACAAGATGTCTTAAGCACTGCTGGTGGCGAGGTTGGATCCCAATGCACAGTTGTTACTGATAATTACTGTGAGGATGCCTATGATTTACTTCAAAACCCTGTGTTGAAGAAACTATTGCTTGCTGGTATTCTTTTAGACACACAGAATCTAAAAGCATCTGCGTCAATATCGATGACAAGAGATGCAGAGGCAGTCCAGTTGCTGTTGGTTGGCTCAGCCCCAAATTACAGATATGCTTTATTTGATCAATTGACACACGACCAAAAAACTGCTTCTTTTGTCGAAGCTTTGAACCATAACTATGGGAAGCCTCCTGATGAAGGTGACCAAAACAGTGAAGGAAATACGGAGCATAAAGTTCGCGAGAGAAAGTCAAGCTCTACATCTGACCGTGAACCCACCATGTCAAGCTCAAAAACAAATTCCTTCGACACGAAAAGTTCTAAAGCTAACAAGGTTTCACCAAATCAAGTCAAACTTGTTACGCCACCTTTGCTATCTCCTACTCCAGCACCAGCACCACAAAATGCCGAAAGGGAGGCCTCTCGTGGGAAAAACAAGTTCTTCTTGGCCAGGTGGTTTGGTTTTGGTTCAAAATGA 1860 0.5038 MERRLGRESKGSLSLQKKMAETRRREKPAPDLTDFMNDMFFGAVDMDHKTYDLIGGKSVAVDDDDDEGFDDSTRSNSARLTQEWLQEARRIVASSPSRCDSPGRLLGSPRFAATQPGSPLPSLDRRESLSRTRSARRFRAGEGISDEILSKTATHTRNKSDTFAQASSDGDGSPATAVHKWFSNMLKPTNNINTQPPPSPPDSTYLSSLPPRQPLPRKSRFQTEPSAAPHPQGILPPNSRRTFKTCTPSPENPPSASLPLSPPRKLVESAHRRTISSSTCSQERIAPKHVGQKREEVGEEHSLNGFLREQRILFQKISRGELHANAQIVLSGPSNSTASLVAAICHAWLLGYRQREKECGSERVVVVPVMNVKRGSMWKLRQAAWLFHHAGLDATALLFTDEVNMERPLMTGQLSVLVVGQDVLSTAGGEVGSQCTVVTDNYCEDAYDLLQNPVLKKLLLAGILLDTQNLKASASISMTRDAEAVQLLLVGSAPNYRYALFDQLTHDQKTASFVEALNHNYGKPPDEGDQNSEGNTEHKVRERKSSSTSDREPTMSSSKTNSFDTKSSKANKVSPNQVKLVTPPLLSPTPAPAPQNAEREASRGKNKFFLARWFGFGSK 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1439 619 Gene3D - 297 426 - -
Ssu6g1439 619 Gene3D - 427 509 - -
Ssu6g1439 619 PANTHER - 8 617 - -
Ssu6g1439 619 MobiDBLite consensus disorder prediction 518 604 - -
Ssu6g1439 619 MobiDBLite consensus disorder prediction 149 172 - -
Ssu6g1439 619 MobiDBLite consensus disorder prediction 17 32 - -
Ssu6g1439 619 PANTHER BNIP - RELATED 8 617 - -
Ssu6g1439 619 MobiDBLite consensus disorder prediction 530 549 - -
Ssu6g1439 619 MobiDBLite consensus disorder prediction 126 144 - -
Ssu6g1439 619 MobiDBLite consensus disorder prediction 193 207 - -
Ssu6g1439 619 MobiDBLite consensus disorder prediction 1 34 - -
Ssu6g1439 619 MobiDBLite consensus disorder prediction 550 583 - -
Ssu6g1439 619 MobiDBLite consensus disorder prediction 92 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1439 Ssu-Chr6 23526817 23531007 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1439 - - lja:Lj4g3v1415280.1 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1439 6 23526817 23531007 Ssu6g1439 6 23526817 23531007 ECH