Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1417 ATGCCAGCAGCAACAGCAAACCCCTCCCTCCTCCTCTGTCCAAGCCCCCAGAACCCAAGACGACGGCATTCCCGCGGACGAGGTGAAAATCCTGGTGAAGTTCAAATCCCGCCACAACTACATCCGCGTTCTAGAAGTTTCCAGAAAAGCGGACCACCCCTTCCGCGGGTCCAGGCTCCTTCTCCTGGACGCCCCGGGAAACATCCACAGCATATCCTTCCTCTTCAAATCCCTCACCAACACCTACTTCGACGTGTTCGCCACGCTCCCGCCCGTCGTGCCCCCCGGCCCCTCGCCCTCCTCGGCTTCGGCGCCGGCACCGCCGCCCGCGTCCTCCTCGACCACTACCCCGACGCCGTCCTCCACGGGTGGGAGCTCGACCCCGCCGTCGTCCAGGTCGGGCGGGAGTACTTTAGCCTCGGCAGGCTCGAGAGGGAGCACCGGCAGCGCCTCTTCATCTACGTCGGGAACGCGCTGAACGCGACCGTGCCCAACGGGTTCTCCGGGATCGTGGTGGACCTGTTCTCCAAGGGGAGCCTGATTCCCGAGCTGCAGGAGCCCGCCACGTGGGAGAAGCTGAGGGGGCGGTTGAGGAAGGGAGGGAGGATTATGGTGAACGTTGGAGGGAGCTGCGTGGAGGCGGAGAATAGGCTCAGGGATGGGAAGGTTGTTATGGAAGAGACTCTGAGGGCGATGAGGGAGGTTTTTGGAGAGAAGCTTTTTGTTCTGAGTCTTGGGAATCGTAAGGATGATAGCTCGCTTGCTCTTACTGGGGACTTGCCTCAACTTGAGGACTGGAAGAAACGGCTTCCCGGTCCCTTGAAATGTTACGCGCACTTGTGGGAGCCCTACTCTGCTTAG 861 0.6132 MPAATANPSLLLCPSPQNPRRRHSRGRGENPGEVQIPPQLHPRSRSFQKSGPPLPRVQAPSPGRPGKHPQHILPLQIPHQHLLRRVRHAPARRAPRPLALLGFGAGTAARVLLDHYPDAVLHGWELDPAVVQVGREYFSLGRLEREHRQRLFIYVGNALNATVPNGFSGIVVDLFSKGSLIPELQEPATWEKLRGRLRKGGRIMVNVGGSCVEAENRLRDGKVVMEETLRAMREVFGEKLFVLSLGNRKDDSSLALTGDLPQLEDWKKRLPGPLKCYAHLWEPYSA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1417 286 Gene3D Vaccinia Virus protein VP39 66 270 IPR029063 -
Ssu6g1417 286 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 91 243 IPR029063 -
Ssu6g1417 286 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 94 281 - -
Ssu6g1417 286 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 94 281 - -
Ssu6g1417 286 MobiDBLite consensus disorder prediction 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1417 Ssu-Chr6 23259287 23260147 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1417 - - gmx:100819757 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1417 6 23259287 23260147 Ssu6g1417 6 23259287 23260147 ECH