Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1410 ATGATGGCTTCCCCTACTCATTTCGACGATGAATTTGATTTTGGAGGCGGTTTTGGCGGAACGCATTCagGAAATAAGAGGTCATCTCCCGACTATGACGAGGATGATTATGACAATGATCCTTTTGGACAGAAGAAGGCCAAATCAAAAGCTGAAGAAGCTGCTTCTGGTGTGACAACAGGAATGATTTTGTCTCTTCGTGAGAGTCTTCAGAACTGTCAGGACACGCTTGCTACATGCCAAAATGAACTTGATGCCACAAAATCTGAGATTCAGAAGTGGCATTCTTCATTTCAAAATGAACCTTTTATACCTTTTGGGACCACTCCAGCACCAAAATTGGTGATTAATTATCTTCAAGCTCTGAAATCATCTGATGAATCTTTAAGAGAGCAGCttgaaaaagcaaagaaaaaggagGCTGCATTCATTGTCACATTTGCAAAACGGGAACAAGAGATAGCAGAGTTGAAGTCTGCTGTACGGGACCTGAAAGCTCAACTTAAGCCAGCTTCTATGCAGGCGAGGAGGTTGTTACTAGATCCAGCGGTTCATGAAGAGTTCACACGATTAAAGAATTTAGTTgaggaaaaggataaaaaagtaAAGGAGTTGCAAGATAACATTGCTGCTGTAAATTTTACCCCCCAAAGCAAGATGGGGAAGATGCTGATGGCTAAATGTAGAACCCTACAGGAGGAAAATGAGGAGATTGGGAATCAGGCTTCTGAGGGCAAGATGCATGAATTAGCAATGAAACTTTCAGTGCAGAAATACCAAAATGCAGAACTCAGAAGTCAATTTGAAGGGTTGCAAAAGCATATGGATGGATTGACAAATGATGTGGATAGATCAAATGAAATGGTATTAATGTTGCAAGATAAATTAGAAGAGAAGGATCAGGAGATCCAAAGACTGAAAGATGAGTTGCAACAAAAAAGCCTTGTGGAGGATGGGAGAACAGATCCAGCATCTCATAGGAAAGATGTTGATGAAACGATACCTACGGATGACGCTGACTAA 1023 0.3959 MMASPTHFDDEFDFGGGFGGTHSGNKRSSPDYDEDDYDNDPFGQKKAKSKAEEAASGVTTGMILSLRESLQNCQDTLATCQNELDATKSEIQKWHSSFQNEPFIPFGTTPAPKLVINYLQALKSSDESLREQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPASMQARRLLLDPAVHEEFTRLKNLVEEKDKKVKELQDNIAAVNFTPQSKMGKMLMAKCRTLQEENEEIGNQASEGKMHELAMKLSVQKYQNAELRSQFEGLQKHMDGLTNDVDRSNEMVLMLQDKLEEKDQEIQRLKDELQQKSLVEDGRTDPASHRKDVDETIPTDDAD 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1410 340 Coils Coil 261 316 - -
Ssu6g1410 340 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 2 333 IPR033757 GO:0000381|GO:0005634|GO:0080009
Ssu6g1410 340 Coils Coil 188 208 - -
Ssu6g1410 340 MobiDBLite consensus disorder prediction 309 340 - -
Ssu6g1410 340 Pfam WTAP/Mum2p family 135 289 IPR033757 GO:0000381|GO:0005634|GO:0080009
Ssu6g1410 340 MobiDBLite consensus disorder prediction 1 53 - -
Ssu6g1410 340 MobiDBLite consensus disorder prediction 27 52 - -
Ssu6g1410 340 MobiDBLite consensus disorder prediction 309 334 - -
Ssu6g1410 340 Coils Coil 147 167 - -
Ssu6g1410 340 PANTHER PROTEIN OF 37 KDA-LIKE PROTEIN, PUTATIVE-RELATED 2 333 - -
Ssu6g1410 340 Coils Coil 63 90 - -
Ssu6g1410 340 Coils Coil 119 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1410 Ssu-Chr6 23118989 23130894 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1410 K22824 - gmx:100776997 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1410 6 23118989 23130894 Ssu6g1410 6 23118989 23130894 ECH