Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1397 ATGACTTCAAGCATGTTGAGTGGGGAGCGAAGATGGGCCTCTTCTTCCAGAAGAGGTGGTATGACTGTTTTAGGGAAAGTTGCAGTTCCAAAACCTATCAACTTACCCAGTCAGAGgCTAGAAAATCATGGTCTGGACCCAAATGTGGAGATTGTTCCCAAgggtACACTCAGCTGGGGTAGTAGATCATCAACTTCTACATCCAATGCATGGGGGTCTTCTTCACTGTCCCCAAATACTGATGGTGGTACTAGTTCACCCAGTCACCTCAGTGCCCGTCCATCATCTGGTGGAAGTGGCACACGGCCTTCTACTGCTGGTAGTGATAGGGTTCTTGAGCCTACTGCTAATTCATGGGGGTCAAATTCTCGGCCTTCATCAGCATCAGGGGTACTGTCAACAAATCAGTCTTCACTGGCATCATTGCGTCCTCGCAGTGCAGAAACAAGACCTGGTAGCTCACAGCTGTCTCGGTTTGCTGAACCCTTGACTGAAAATTCAGGTGCTTGGAATGCTGCTAGGACTACAGAAAAACTGGGAGTTACACAACCCAAGAATGAAGAATTTTCTCTAAGCTCTGGAGACTTTCCAACCCTTGGTTCTGATAAAGATAAGTCTGTCCTGAATTCTGAGTTGCAAGACAACAGTTCTCAAGCTCACCCTGACTCATCTTCTGGACTcaggaaagagataaatgagGCCCCTGTTATCGATGATGTTCCTGTAAATGCAAATATTAAGGGTGGAACTGTAAATTCTTGGAGGAGAGATTATCAGGCTTATAATGAGGAAGGTGTGAGGCCAGGCATAGAGAAATGGCAGGGAAATTCCCAGCCTTATCCTAATGCTGGTATTCCTCCTCAACACTATGATACTTGGCATGGTCCTCCAGTAAATAACCCCCAGGGCTGCGTTTGGTTTAGGGGTCCTCCTGGTGGTCCTCCATTTGGAAATCCTGTTACTCCAAGTGGCTTTCCAATTGAACCATTTCCATATTACCGTCCACATATTCCCCCTACTGGTCTTGTGAACCCACCCCCAGTTCCCCCTCCTGGAGCTGGACCAAGAGGGCACCATAAAAATGGAGATGTCTACAGACCTCATATGCCTGATGCCTTTATTCGCCCAGGCATTCCTATCAGACCTGGTTTTTATCCTGGTTCAATGGCCTATGAGGGATATTACAGTCCTCCAATGGGCTACTGCAATTCTAATGAACGGGATGTTCCTTTCATGGGAATGGCTACTGGATCCCCTGTCTATAATAGGTACTCAAATCAAAATCCCCCCGAACCTGGCAATTCACAAGGTAGACCTGGTGGATATGGTAATGCTGGGAAGCAATTGGCCTCAGAGCAAGTGGAATCCAGCCATCCTCCTGATACAGCTGGACCATACAGAGTTCTTCTTAAGCAGCATGAGTCAGATGGGAAAAATGAACCAACAAATTGGGAGGATTCAGAGACAACCAATGCAAAATATGTTGATGATAGGGGCCAACCAAGAATGACTGTTTGGGAGAATGAGCAGAGATCAAATTACAGAAAGAATGAGGAGATGGATTTGAGGACAAGTAATCATGGTGAAGAAGTTTCTTCTCGGACTTCAGAAAATCAAGTATCTAGTTCTTCTGTCATGAAGGCCAAATTTTCCGAAAGTTCgggaaacaaaagaaaatctgATGATATTTCAGCAAGGAAATTGGATGATGTTGCCTCTGATATGCTAGAAATTGCCCGGAGACCATCTGCTCCAAAAGATGCCAGTCTGATTCAAAAGATAGAGGGTTTAAATGCAAAAGCCAGGGATAATTCATCTGCTAGAATTAGAGAGGAGCAAAGGAATAAATCTCATGCTGGTAATGCTCTGATAAACCATGTGGAAAATGCAGTTGGTGCTGATGTAGTGTTTCCAGCAAGAACCCATGCCACAGAAATCGTAAATCCAGCCCATCGTGAAATGGGTGCTGCTGGTGCGGAAAAGAAATTTGAATCCTTATCTTTCAGTGGAACAGCCTCATCCAGGCAAACTGCTCATGGAATGCAAGGTAGAGGTGACCATCGTAACAAGGGAAGATCAAACAGTCAAGATGCTGATGGTTGGCGGAAGAAATCCATGGTTGAAGATTCTTCAGCTTCATCAGGTACACAGTTGGAAACATCTAATGTTCTTGTGGGTGACCATCAAATTTCTGTTCAGACCTACGATAGGTCTGGCTCCTATAACCAAGCAAGGCATATTGGAGAATCTGTTCAAACCAAGTCTGATCCTGCTGACAGCCATGCACAGCATACCAAAATGAAAGAGTTAGCTAAGCAAAAGACTAAGCAACTGcaggaagaagaggaggaacGGCAAGAAAGCAAAAGGCTAAAGCTCTTGCAAAGTTGGATGAGTTAA 2400 0.4396 MTSSMLSGERRWASSSRRGGMTVLGKVAVPKPINLPSQRLENHGLDPNVEIVPKGTLSWGSRSSTSTSNAWGSSSLSPNTDGGTSSPSHLSARPSSGGSGTRPSTAGSDRVLEPTANSWGSNSRPSSASGVLSTNQSSLASLRPRSAETRPGSSQLSRFAEPLTENSGAWNAARTTEKLGVTQPKNEEFSLSSGDFPTLGSDKDKSVLNSELQDNSSQAHPDSSSGLRKEINEAPVIDDVPVNANIKGGTVNSWRRDYQAYNEEGVRPGIEKWQGNSQPYPNAGIPPQHYDTWHGPPVNNPQGCVWFRGPPGGPPFGNPVTPSGFPIEPFPYYRPHIPPTGLVNPPPVPPPGAGPRGHHKNGDVYRPHMPDAFIRPGIPIRPGFYPGSMAYEGYYSPPMGYCNSNERDVPFMGMATGSPVYNRYSNQNPPEPGNSQGRPGGYGNAGKQLASEQVESSHPPDTAGPYRVLLKQHESDGKNEPTNWEDSETTNAKYVDDRGQPRMTVWENEQRSNYRKNEEMDLRTSNHGEEVSSRTSENQVSSSSVMKAKFSESSGNKRKSDDISARKLDDVASDMLEIARRPSAPKDASLIQKIEGLNAKARDNSSARIREEQRNKSHAGNALINHVENAVGADVVFPARTHATEIVNPAHREMGAAGAEKKFESLSFSGTASSRQTAHGMQGRGDHRNKGRSNSQDADGWRKKSMVEDSSASSGTQLETSNVLVGDHQISVQTYDRSGSYNQARHIGESVQTKSDPADSHAQHTKMKELAKQKTKQLQEEEEERQESKRLKLLQSWMS 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1397 799 Coils Coil 761 791 - -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 552 566 - -
Ssu6g1397 799 Pfam BAT2 N-terminus 15 137 IPR009738 -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 531 551 - -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 1 169 - -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 57 169 - -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 759 791 - -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 707 758 - -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 667 799 - -
Ssu6g1397 799 PANTHER PROTEIN MODIFIER OF SNC1 1 1 786 IPR038808 -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 681 706 - -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 181 205 - -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 421 566 - -
Ssu6g1397 799 PANTHER PROTEIN MODIFIER OF SNC1 1 1 786 - -
Ssu6g1397 799 MobiDBLite consensus disorder prediction 490 530 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1397 - - gmx:100809882 1346.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1397 6 22940941 22945594 Ssu6g1397 6 22940941 22945594 ECH