Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1381 ATGGTGCAGAACATAACACAGAATTGCGTTGGCTCGAACACGATGATGAGGCCAAAGATAGTGTTGTTTGGAGATTCGATAACGGAGCAATCGATCCAAGTGAACGGATGGGGTGTTCCGCTTGCCAATGCCTATTCTCGCAGGGCTGATGTACTTGTTCGTGGTTATGATGGATACAACACTAGGTGGGCTATGTTCTTACTGCATCACCTTTTCCCGCTGAACTCAACTAAACCACCTCTTGCTACCACGATTTTCTTTGGCGCTAATGATGCAGCTTGGTTAGGAAGAACCAGTGAAAGGCTACACGTACCTATTGAAGAATTCAAAGAGAACCTCAGAAAAATTGTTCGACACTTAAAGGAATGCTCACCAACTATGCAAATTGTGCTTATTACTCCACCTCCATTTAGCGAGGAAGGACGCCTGGCTTATgcaatATCCGTATATGGTGAGAATGCTTACAAATTGCCTGAAAAAACAAATGAAGTAACTGGTCAATATGCAAACGCGTGTGTTGAGGTAGCAAAGGAAATCGGCGTGTGGTATATCAATCTATGGTCCAAAATGCAAGAAACAGATGGCtggcaaaataaatttttgagTGATGGGTTGCACCTTACAACGGAAGGAAATACAATAGTCTACGAAGAAGTGGTAAAGGTGTTCAATGAAGCAGGGCTTTCTGCTGATAAAATGCCACTTGATTTCCCTCACCACTCCAAAATTGATTACAAACATCCTGAGAGAGCGTTCCAGCAGGATGTTTGTGATATCCCATTGTGA 786 0.4211 MVQNITQNCVGSNTMMRPKIVLFGDSITEQSIQVNGWGVPLANAYSRRADVLVRGYDGYNTRWAMFLLHHLFPLNSTKPPLATTIFFGANDAAWLGRTSERLHVPIEEFKENLRKIVRHLKECSPTMQIVLITPPPFSEEGRLAYAISVYGENAYKLPEKTNEVTGQYANACVEVAKEIGVWYINLWSKMQETDGWQNKFLSDGLHLTTEGNTIVYEEVVKVFNEAGLSADKMPLDFPHHSKIDYKHPERAFQQDVCDIPL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1381 261 CDD Isoamyl_acetate_hydrolase_like 19 222 - -
Ssu6g1381 261 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE FAMILY PROTEIN, EXPRESSED 16 254 - -
Ssu6g1381 261 Pfam GDSL-like Lipase/Acylhydrolase family 22 213 IPR013830 -
Ssu6g1381 261 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 16 254 IPR045136 -
Ssu6g1381 261 SUPERFAMILY SGNH hydrolase 17 223 - -
Ssu6g1381 261 Gene3D SGNH hydrolase 16 251 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1381 Ssu-Chr6 22742853 22746721 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1381 K23978 - gmx:100782709 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1381 6 22742853 22746721 Ssu6g1381 6 22742853 22746721 ECH