Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1357 ATGGGCAAAGAGACTATTGTTTCTCAATATCCCAGCAAATCACAAGTGCAGGGTGAGAATTTTGATCATCAAAACCTTGTAACATCAGCAGCTGATAATGGAAAGGAGGAGAGTATTGGAGCACCTAAAGGCACATCTCCTGCGCTGCCCGGGTGGTATGCTGATGTATCCTGGCCGGGTGAagcacacatatataaaatggaAAAGATCATATTCCAAGGGAAATCAGAATTCCAAGAGCTTCTTGTATTTGAGTCATCTAGACATGGCAAGGTTGCAATTCTGGATGGGTATATCCAGCTGACCGAGAATGATGAATTTGCTTACCAAGAGATGCTCACTCACCTCGCACTCTGTTCCATTCCAAATCCAAAGAAGGTGCTGCTTGTTGGAGGGGGAGATGGGGGAATTCTTAGGGAAATCTCACGCCATTCTTCTGTTGAGCATATTGATATATGTGAAATAGACAAAATGGTGATTGATGTTTATAAGAAGTTTTTCCCAGATATAGCTGTTGGTTACGAGGATACCCGAGTGCATGTTCATATCAGCGACGGAATTGCGTTCATCAATTCTGTTCCTGAGGGCACTTACGATGTCATTATATTGGATGCTTTTCAACCAATGGGACCTATTGCGGAAGTTCTTGCGGATAACTGCTTCTTAGAATCAGTAGCAAAGGCTCTTAGACCCGGTGGAGTGCTGTCTGCTCCAGCAGACAGCTTATGGCATAAGAACTTCGTAGTTGCAGATACCATAGCAAATTGCAAGAAGATATTCAAAGGCTCCGTTAACTACGCTTGGACCACAGTTCCTACATATGCAAGGCATTCcttatttaactttatatttaCCTTTCTAAATTCTAGCTCTCCCTTTGGAGTGATTGGATTCATGCTTTGCTCCACGGAGGGGCCCCCAGTCAACTTCAAACACCCAATAAGTCGATTGAATCCAGAGCAAAATGGGGTAGCAAAGGGTCCTCCTAAGTTTTATAACTCGGAGGTAATCCGTTGA 1017 0.4258 MGKETIVSQYPSKSQVQGENFDHQNLVTSAADNGKEESIGAPKGTSPALPGWYADVSWPGEAHIYKMEKIIFQGKSEFQELLVFESSRHGKVAILDGYIQLTENDEFAYQEMLTHLALCSIPNPKKVLLVGGGDGGILREISRHSSVEHIDICEIDKMVIDVYKKFFPDIAVGYEDTRVHVHISDGIAFINSVPEGTYDVIILDAFQPMGPIAEVLADNCFLESVAKALRPGGVLSAPADSLWHKNFVVADTIANCKKIFKGSVNYAWTTVPTYARHSLFNFIFTFLNSSSPFGVIGFMLCSTEGPPVNFKHPISRLNPEQNGVAKGPPKFYNSEVIR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1357 338 Hamap Polyamine aminopropyltransferase [speE]. 51 337 IPR001045 GO:0003824
Ssu6g1357 338 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 52 277 IPR029063 -
Ssu6g1357 338 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 127 140 IPR030373 -
Ssu6g1357 338 PANTHER SYNTHASE 1, PUTATIVE-RELATED 21 336 - -
Ssu6g1357 338 PANTHER SPERMIDINE/SPERMINE SYNTHASE 21 336 IPR001045 GO:0003824
Ssu6g1357 338 Pfam Spermidine synthase tetramerisation domain 51 103 IPR035246 -
Ssu6g1357 338 Gene3D Spermidine synthase, tetramerisation domain 35 102 IPR037163 -
Ssu6g1357 338 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 50 287 IPR030374 -
Ssu6g1357 338 Pfam Spermine/spermidine synthase domain 106 279 - -
Ssu6g1357 338 Gene3D Vaccinia Virus protein VP39 103 338 IPR029063 -
Ssu6g1357 338 MobiDBLite consensus disorder prediction 7 22 - -
Ssu6g1357 338 CDD AdoMet_MTases 148 235 - -
Ssu6g1357 338 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1357 Ssu-Chr6 22144904 22148641 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1357 K00797 - gmx:100788406 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1357 6 22144904 22148641 Ssu6g1357 6 22144904 22148641 ECH