Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1332 ATGCTGCTGAGTAGTAACGTACAGTTTTCTCGGTGGACTTTCTTCAAACACCTTACGACACGGAAATTCAAATCAACAACAGCACTCTGTCAGCACAAATCCGTCGCCACTCTCTCCCACTTCGGAACGCTAACCTCCCGCCAGAAAGACCAGATTCATCTCTACGTCGACACTCTTCTTCAATGGAACAAGCGCATGAATCTCACCGCAGTTCGAGAGGTGAATGAAGTGATGGAAAGGCACGTGGAGGACTCCCTCGCGATTTTGCCTCCGTTGAGCGATTGTTACCGCTCGCACTGCGGCGCTTCATGCGATAAGCTGAGTCTCGTCGACGTTGGAACTGGCGCTGGCCTTCCCGGAGTAGTTTTGGCCATAGCTCGCCCAGAGTGGGATGTAACGCTGCTGGAGTCTATGAACAAGCGATGCGTCTTTTTGGAGCACGCTGTCAGTGTTATCGGTTCCTCAAACGTTCAAATTGTAAGAGGAAGAGCAGAGAGTTTAGGGCAGAATCCTTGCTTCAGAGAGCAATTTGACGTAGCAGTGGCCAGGGCAGTTGCAGAAATGAGAACATTAGCTGAATATTGTCTTCCTTTGGTTCGTGTTGGTGGGTTGTTTATTGCTGCCAAGGGTCATGATCCTGTGGATGAAATTAAGAAAGCTGAAAGTGCCATCCAGAAGGTGGGTGCATCGCTATTGCAAGTATGCTCAGTGGAATCGCAAAGCCCATATGGTCAGCGAACTGTTGTCATATGTTCTAAGGATCGTCCTACCTCATTGAAATACCCCCGTGATCCAGATAACGACACGGAAATTGCAAGCcatctctatctctctctcctcGCCTGTCATGTATTCATTGCACATTTGCTCTATGATTGGAATCGGGACGCAAATGGTTTGCGCACATCCATTGTCAAAGCTTTTATACTACTAAACATCATAACTATGACTACGATGATTTGTAGATGA 969 0.4665 MLLSSNVQFSRWTFFKHLTTRKFKSTTALCQHKSVATLSHFGTLTSRQKDQIHLYVDTLLQWNKRMNLTAVREVNEVMERHVEDSLAILPPLSDCYRSHCGASCDKLSLVDVGTGAGLPGVVLAIARPEWDVTLLESMNKRCVFLEHAVSVIGSSNVQIVRGRAESLGQNPCFREQFDVAVARAVAEMRTLAEYCLPLVRVGGLFIAAKGHDPVDEIKKAESAIQKVGASLLQVCSVESQSPYGQRTVVICSKDRPTSLKYPRDPDNDTEIASHLYLSLLACHVFIAHLLYDWNRDANGLRTSIVKAFILLNIITMTTMICR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1332 322 CDD AdoMet_MTases 109 206 - -
Ssu6g1332 322 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 40 264 IPR029063 -
Ssu6g1332 322 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 41 250 IPR003682 GO:0005737|GO:0006364|GO:0008649
Ssu6g1332 322 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 267 IPR003682 GO:0005737|GO:0006364|GO:0008649
Ssu6g1332 322 Pfam rRNA small subunit methyltransferase G 49 239 IPR003682 GO:0005737|GO:0006364|GO:0008649
Ssu6g1332 322 TIGRFAM rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 54 251 IPR003682 GO:0005737|GO:0006364|GO:0008649
Ssu6g1332 322 Gene3D Vaccinia Virus protein VP39 21 270 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1332 K03501 - gmx:100818428 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1332 6 21790012 21793999 Ssu6g1332 6 21790012 21793999 ECH