Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1312 ATGGCACACCGCCCCTCCCAACGTCGGAACCTGGCAGCTCCAGAATCCAACCCCACAACCCCAAACCCAGATCTCGTCCGAACCTATGAATCCTCTTTCTTGGTAAAACACTTGTCGAGCCTAAACTTGAGTCATAGTCACAAACACTCTCCTCTTGTTGACGCCCATGTGCAGGCCAAAGCCATGACAACCTCTGCCATAGTCGCACCGGAGAAAGAGAGCACTGTGCCTTCGAAGAGAACCCACAAAGAGAAGCCCCAAAGGCCCTGTTTGGAATTGGAAAGGAGGAAACTTCGTGATCCTAATGATAAGGGTGTGGTTAAGGATGCTAAGGTTGAAAAACCTAGGAATCCTCATTTGGAGAAACATGGTGTTGTTGAGAGAATGTCTGTGTCTCTGGCTCCGGGTGGGGGTAGAAGGAGATCCTTCTGTGGGTCACAGGTTGATTTGGGAGATGTCTTTGCAATCAATGGGGCTAAAATGGTTTCAGCTGATATGCCACCGTTTATGCAGATCCATGCTGTGAATTGTGCCAGAAAGGCTATAGATAGCATGGAGAAGTTCACATCCAAGACCCTTGCACTCTCCCTCAAGAagGAATTTGATGGGATGTATGGGCCGGCATGGCACTGCATTGTGGGGACTAGTTTTGGGTCTTTTGTGACCCATTCGGTTGGAGGGTTTCTATATTTCTCCATGGATCAAAAATTATACATCCTCTTATTTAAGACCGCGGTACAAAAAGCAGGCTGA 753 0.4794 MAHRPSQRRNLAAPESNPTTPNPDLVRTYESSFLVKHLSSLNLSHSHKHSPLVDAHVQAKAMTTSAIVAPEKESTVPSKRTHKEKPQRPCLELERRKLRDPNDKGVVKDAKVEKPRNPHLEKHGVVERMSVSLAPGGGRRRSFCGSQVDLGDVFAINGAKMVSADMPPFMQIHAVNCARKAIDSMEKFTSKTLALSLKKEFDGMYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTAVQKAG 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1312 250 MobiDBLite consensus disorder prediction 10 25 - -
Ssu6g1312 250 MobiDBLite consensus disorder prediction 65 89 - -
Ssu6g1312 250 SUPERFAMILY DLC 157 244 IPR037177 GO:0007017|GO:0030286
Ssu6g1312 250 MobiDBLite consensus disorder prediction 1 25 - -
Ssu6g1312 250 MobiDBLite consensus disorder prediction 75 89 - -
Ssu6g1312 250 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 155 245 IPR037177 GO:0007017|GO:0030286
Ssu6g1312 250 Pfam Dynein light chain type 1 160 244 IPR001372 GO:0007017|GO:0030286
Ssu6g1312 250 PANTHER INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE 35 249 - -
Ssu6g1312 250 SMART Dynein_light_2 154 244 IPR001372 GO:0007017|GO:0030286
Ssu6g1312 250 PANTHER DYNEIN LIGHT CHAIN 35 249 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1312 Ssu-Chr6 21444167 21445089 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1312 - - gmx:100806149 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1312 6 21444167 21445089 Ssu6g1312 6 21444167 21445089 ECH