Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1291 ATGACGACGCCGTTTCAGCAGCCACCGCAAACCGTAAGGAGACTGGTCGTGGAAGTAATCGACGCGCGCAACCTGCTCCCGAAGGATGGGCAAGGTAGCTCGAGCCCTTACGTGGTGGCGGACTTCGATGGCCAGAGGAAGCGAACAACCACCCGGTTCAAGGAGCTGAACCCGGTCTGGAACGAGCCTCTGGAGTTCATCGTGTCCGACCCGGACAACATGGAGTTCGAGGAGCTCGAAGTGGAGGTCTACAACGACAAGAAGTTCGGCAACGCAAGCGGCCGCAAGAATCACTTCCTCGGGAGGGTTAAGCTGTACGGAACTCAGTTTTCCACAAGAGGAGAAGAAGCTCTCGTCTACTACACGCTGGAGAAGAGGAGCGTATTCAGTTGGGTACGCGGCGAAATTGGACTCAGGATTTATTACTACGACGAGATGCTCGATGAAGACGACAAACCGCCGCCGCAGGAGGAGCAACCTGAGAGAACGGAGCAAAACAAGCCCCCGCCGGGGGTGGGGCTTGTCCAGGAGGAATCGCCGCGCGTGGAGCAATGCGTGCCTCTTCCTACAGGTCCTCCTCATTCGCCGGGCGTGGTGGTTGTGGAGGAATCGCCGCCGCCGGTGGTGCAGGTTCCGCAGGATCCGCCCTTGCCGGAAATGTGTGACCCTCCGGCATCGGAAATGCAGTTCCACCAGGAGGTGAGGAAAATGCAGGCCAGCAGAGGGGAGAGGGTGAAGATTTTGAGGAGGCCGAACGGTGATTACTCGCCCAAGGATATCTCCGGGAAGAAAACTGGCGCTGAGTCCGAGAGGGTTCATCCGTTCGATCTGGTGGAGCCGATGCAGTACCTGTTCGTGAGAATCGTGAAAGCTCGCGGGCTTGCTCCTCCCACCGAAGGCCCATACGTGAAGGTTAGAACGTCCAGCCACTATGTGAGATCGAAGCCCGCCAGTTTCCGGCCCAGCGAGCCCACCGACTTGCCCGAGTGGAACCAGGTGTTTGCGCTGGGTTACAACAAGACTGATGTGAACGGCGCCACGCTGGAGATTTCGGTGTGGGATTTCCCGACGGAGAATTTTCTTGGCGGCGTTTGCTTCGATCTTTCCGACGTTCCCGTAAGAGATCCTCCGGATAGTCCCTTGGCGCCGCAATGGTACCGCCTCGAAGGAGGCTCCGCCGATCAGAATCCCGGCAGAGTTTCCGGCGACATTCAGCTCTCCGTGTGGATCGGGACGCAATCCGACAGCGCGTTCCCGGAAGCGTGGTGCTCAGATTCACCGTACGTGGCGCACACTCGATCCAAGGTTTACCAGTCCCCGAAGCTGTGGTACCTGCGCGTGACGGTGGTGGAAGCGCAAGACCTGAATATTGCTCCGAATCTGCCTCCATTGACGGCGCCAGAAGTGAGGGTGAAGGTGCAATTAGGGTTCCAATCGCAGCGAACGAGGCGAGGATCCATGAACCACCGTAGCTTATCGTTCCACTGGAACGAGGACCTTCTCTTTGTTGCAGCGGAGCCTCTGGAAGATTCTGTCATCGTTCTCCTGGAAGATCGGACCAGCAAGGAAGCGGCGCTGCTAGGCCACATCGTGCTTCCGCTGAGCTCCATCGAGCAACGAATCGACGAGCGCCACGTGGCTGCGAAGTGGTTCCCCTTAGAGGGCGGGCCCTACTGCGGGCGAGTCCACCTGCGCCTCTGCCTGGAGGGCGGGTATCACGTGCTGGACGAAGCGGCGCACTTGTGCAGCGATTTCCGTCCCACCGCGAAACAGTTATGGAGACCGCCGGTGGGGATTCTAGAACTGGGGATTCTGGGCGCTCGCGGCCTCCTTCCGATGAAATCCAAAGGCGGTGGAAAGGGCTCCACCGATGCTTACTGTGTGGCCAAGTATGGGAAAAAGTGGGTCCGAACCCGCACCGTAACCGACAGCTTCGATCCACGCTGGAACGAGCAGTACACGTGGCAGGTGTACGACCCCTGCACTGTCCTCACCGTTGGCGTGTTCGACAACTGGCGCATGTTTGCTGACGTGTCAGAGGACAGGCCCGATTGCCGTATCGGCAAGGTACGAATACGCGTGTCTACGCTGGAGAGCAACAGGGTGTACACCAATTCCTACCCCCTCCTGGTGCTCACGCGAACCGGGTTGAAGAAGATGGGGGAAATCGAGCTAGCCGTTCGGTTCGCGTGCCCCTCGTTGTTGCCCGACACGTGTGCGGTTTACGGGCAGCCCCTGCTTCCTCGAATGCACTATCTCCGCCCGCTCGGGGTGGCCCAGCAGGAGGCTCTGCGCGGGGCCGCCACCAAGATGGTGGCGCAGTGGCTCGCGCGGTCGGAGCCGCCGTTGGGGCATGAGGTGGTTCGGTACATGTTGGATGCGGACTCGCACGTGTGGAGCATGAGGAAGAGCAAGGCGAATTGGTTCAGGATCGTGGCGGTTTTGGCTTGGGCCGTTGGATTGGCCAAGTGGTTAGATGATATTAGAAGGTGGAAGAACCCGGTTACCACAGTGCTACTCCACATTCTGTATCTGGTGCTTGTTTGGTATCCGGATTTGATTGTCCCCACTGGGTTCTTGTACGTGGTCTTAATTGGGATATGGTACTACCGGTTCAGGCCCATGATACCGGCTGGGATGGATACTCGCTTGTCCCAGGCCGAAGCGGTTGACCCGGATGAGTTGGACGAGGAATTTGACACCATGCCAAGTTCGAAGCCACCCGACGTAATTCGAATGCGCTATGATAGGTTAAGAATGCTGGCTGCTCGGGTCCAAACGGTGTTGGGTGATTTTGCCACTCAGGGAGAAAGGGTTCAAGCCTTGGTTAGTTGGAGGGACCCCAGGGCCACCAAGTTGTTCATTGGCGTCTGCCTTGCCATAACTGTCACACTCTATGCAATGCCGCCAAAAATGGTGGCGGTGGCTTTGGGGTTTTATTACCTCCGCCACCCCATGTTCCGGAACCCAATGCCCTCCGCCACCTTGAACTTTTTCCGGCGACTTCCCAGCCTGTCTGATCGCTTGATGTAG 3033 0.5823 MTTPFQQPPQTVRRLVVEVIDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNEPLEFIVSDPDNMEFEELEVEVYNDKKFGNASGRKNHFLGRVKLYGTQFSTRGEEALVYYTLEKRSVFSWVRGEIGLRIYYYDEMLDEDDKPPPQEEQPERTEQNKPPPGVGLVQEESPRVEQCVPLPTGPPHSPGVVVVEESPPPVVQVPQDPPLPEMCDPPASEMQFHQEVRKMQASRGERVKILRRPNGDYSPKDISGKKTGAESERVHPFDLVEPMQYLFVRIVKARGLAPPTEGPYVKVRTSSHYVRSKPASFRPSEPTDLPEWNQVFALGYNKTDVNGATLEISVWDFPTENFLGGVCFDLSDVPVRDPPDSPLAPQWYRLEGGSADQNPGRVSGDIQLSVWIGTQSDSAFPEAWCSDSPYVAHTRSKVYQSPKLWYLRVTVVEAQDLNIAPNLPPLTAPEVRVKVQLGFQSQRTRRGSMNHRSLSFHWNEDLLFVAAEPLEDSVIVLLEDRTSKEAALLGHIVLPLSSIEQRIDERHVAAKWFPLEGGPYCGRVHLRLCLEGGYHVLDEAAHLCSDFRPTAKQLWRPPVGILELGILGARGLLPMKSKGGGKGSTDAYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVSEDRPDCRIGKVRIRVSTLESNRVYTNSYPLLVLTRTGLKKMGEIELAVRFACPSLLPDTCAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPPLGHEVVRYMLDADSHVWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPMIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDVIRMRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLAITVTLYAMPPKMVAVALGFYYLRHPMFRNPMPSATLNFFRRLPSLSDRLM 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1291 1010 MobiDBLite consensus disorder prediction 148 181 - -
Ssu6g1291 1010 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Ssu6g1291 1010 ProSiteProfiles C2 domain profile. 581 707 IPR000008 -
Ssu6g1291 1010 MobiDBLite consensus disorder prediction 148 164 - -
Ssu6g1291 1010 Gene3D C2 domain 595 732 IPR035892 -
Ssu6g1291 1010 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 598 750 IPR035892 -
Ssu6g1291 1010 SMART C2_3c 599 706 IPR000008 -
Ssu6g1291 1010 SMART C2_3c 444 546 IPR000008 -
Ssu6g1291 1010 SMART C2_3c 14 119 IPR000008 -
Ssu6g1291 1010 SMART C2_3c 283 380 IPR000008 -
Ssu6g1291 1010 CDD C2D_MCTP_PRT_plant 599 726 - -
Ssu6g1291 1010 Gene3D C2 domain 10 169 IPR035892 -
Ssu6g1291 1010 Gene3D C2 domain 279 422 IPR035892 -
Ssu6g1291 1010 Gene3D C2 domain 429 568 IPR035892 -
Ssu6g1291 1010 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 443 589 IPR035892 -
Ssu6g1291 1010 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 10 1010 - -
Ssu6g1291 1010 Pfam Plant phosphoribosyltransferase C-terminal 855 1010 IPR013583 -
Ssu6g1291 1010 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 144 IPR035892 -
Ssu6g1291 1010 Pfam C2 domain 14 108 IPR000008 -
Ssu6g1291 1010 Pfam C2 domain 283 386 IPR000008 -
Ssu6g1291 1010 Pfam C2 domain 598 709 IPR000008 -
Ssu6g1291 1010 Pfam C2 domain 443 553 IPR000008 -
Ssu6g1291 1010 ProSiteProfiles C2 domain profile. 264 386 IPR000008 -
Ssu6g1291 1010 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 283 428 IPR035892 -
Ssu6g1291 1010 CDD C2C_MCTP_PRT_plant 444 587 - -
Ssu6g1291 1010 CDD C2B_MCTP_PRT_plant 283 412 - -
Ssu6g1291 1010 ProSiteProfiles C2 domain profile. 423 551 IPR000008 -
Ssu6g1291 1010 CDD C2A_MCTP_PRT_plant 14 144 - -
Ssu6g1291 1010 PANTHER BNAA10G16860D PROTEIN 10 1010 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1291 Ssu-Chr6 20951326 20954358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1291 2 1010 Lipid Metabolism Gene Families AT1G74720 71.033 0.0 1547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1291 - - gmx:100783882 1843.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1291 6 20951326 20954358 Ssu6g1291 6 20951326 20954358 ECH