Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1289 ATGGATCGCCAATGGCGTCCTACTCCTCCACCAATCGAACCCAATATCTGCCCCACTTGCTTCCTCTCACACTTCCCCTTTTGCCCTCCCCCACCATTCCCACCCGATCACACCCACCCGCACCCTTTTCCTTACGCCCCCGCCAACCCTAATTTCCCCCCCGATAGAAACTTCAAGAGACCCAGAATCGATGACAACCCCGTCAATTTCTCCGACGACGAGCGCAGATTAAAGCTCATTCGCGATCACGGCGCCAACCCCCCTCAACACAGTTACGCACCGCACCAACACAGCCATCCTAACCAAAACGGCTTCCGCCCCCACGACGCCGTTCCGCCGCTCCTCCACAGTGCTCAGTTCAGATCTTCCCCCCACCCCTTCCACGCTTATCCAGACCCGTTGCAGCGTGCTCCCGACGTTTATGCTCACACTCCTCTCGTTGGCATGCAGCCACAGCCGCCTCACGCTAATTTTCCATCTCATGAAGGACATCATAAGTTGAACGGAAGAGTAGGTCACTATCCTTATCCGTACCCTGCGGGTAATAATAGCAACAGCTCTTGCGATAACATGGAGGGTTCAAGGTTCTTCAGGGGTCAGCCTCCTCTTCCTTCTTCGCCGCCGCCTCCTCTTCCCATGGAACGGTACTTTTCTCCGCCGAAGAAACCGCCTTCTCTCTTTCCCGTTCCCGTGAGTTCCTCTCCTTCGTCGTATTCGCAAGTTCCCGAGCCTCACTCCTTGCCTCAGCCCTATTATCACGCTAAACCCCTTCCGGAATATCCCACCGGTTTTCCTTCCGAGGAACCGTCGAAGCAGTATTTGGGAGATGCGCAACCTTTTTCGTTGAACCAATTTTCTGCTGACAGACCTAAATTTATTGATGCTTCACATTTATTTCGGCATCCACATCGAGCTTCGCGGCCTGATCATTTCGTGATCATCTTTCGAGGCCTTCCAGGTAGTGGTAAGAGTTACCTAGCAAAGATGCTGCGTGATCTTGAGGTGGAAAATGGTGGTGATGCTCCACGAATTCATTCTATGGACGATTATTTTATGACTGAGGTTGAAAAGGTTGAGGATAGTGAGGCATCAAAACCTTCAAGTTCAGGCAGAAACAAGAAGCCTATAACGAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCTTTCAAGAAAACTGTTGAGGAAGGAGTTTTCACCTTTATTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGGTATgaagtttatattttagaagctaCATACAAGGATCCTGTGGGTTGTGCTGCAAGGAATGTCCATGGATTTACACAGGAAGACATAGAAAAGATGTCCAAGCAATGGGAAGAAGCTCCGTCCTTGTATCTGCAGCTTGATGTGAAGTCATTATTTCATGGAGATGATCTAAAGGAAAGCAGAATACAGGAGGTTGACATGGATATGGAAGATGATCTGGCTGATGCATTACCTCCAGTTCAAGGACGAGAAGCTGAGAAAGTTGTTGACCCTCCTGTTGGGGAAGATGCAAGTTTCCTAAAGGCTGGGAAGAGTTGGGATGCTGAAGGGGAACATTCAACAGAAGTCAGGGAATTGGGTAAAAGCAAATGGTCAGAAGATTTTGGTGAAGATGACATCGATCAAACTGAAGGTATGAAGGGCAATATTAATGCTCTGTCTGGGTTAATTCATCAATATGGCAAGGAACGAAAATCTGTACATTGGGGTGATCAGGGTGGCAAGACAGGGTTTTCAATAGGGGCTGCAAGGAAGGTAAATGCTTTGTCTTTAGTGATCGGACCTGGTGCTGGATACAACCTGAAATCTAATCCATTACCTGAAGAGGATAGTCGAACCCGTAATAGTGTGGAGTCAAAGAAGCATAGCATATTTCAAGAGCGAATGCGGGCTGAACGTGAATCTTTCAAAGCTGTTTTTGATAGGAGACGACAAAGGATTGGCGGTCTTGATGTGGAGGAGGACTAA 2055 0.4793 MDRQWRPTPPPIEPNICPTCFLSHFPFCPPPPFPPDHTHPHPFPYAPANPNFPPDRNFKRPRIDDNPVNFSDDERRLKLIRDHGANPPQHSYAPHQHSHPNQNGFRPHDAVPPLLHSAQFRSSPHPFHAYPDPLQRAPDVYAHTPLVGMQPQPPHANFPSHEGHHKLNGRVGHYPYPYPAGNNSNSSCDNMEGSRFFRGQPPLPSSPPPPLPMERYFSPPKKPPSLFPVPVSSSPSSYSQVPEPHSLPQPYYHAKPLPEYPTGFPSEEPSKQYLGDAQPFSLNQFSADRPKFIDASHLFRHPHRASRPDHFVIIFRGLPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVEDSEASKPSSSGRNKKPITKKVMEYCYEPEMEEAYRSSMLKAFKKTVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPVGCAARNVHGFTQEDIEKMSKQWEEAPSLYLQLDVKSLFHGDDLKESRIQEVDMDMEDDLADALPPVQGREAEKVVDPPVGEDASFLKAGKSWDAEGEHSTEVRELGKSKWSEDFGEDDIDQTEGMKGNINALSGLIHQYGKERKSVHWGDQGGKTGFSIGAARKVNALSLVIGPGAGYNLKSNPLPEEDSRTRNSVESKKHSIFQERMRAERESFKAVFDRRRQRIGGLDVEED 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1289 684 MobiDBLite consensus disorder prediction 179 193 - -
Ssu6g1289 684 MobiDBLite consensus disorder prediction 632 657 - -
Ssu6g1289 684 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 95 674 IPR026314 GO:0005634
Ssu6g1289 684 MobiDBLite consensus disorder prediction 83 102 - -
Ssu6g1289 684 MobiDBLite consensus disorder prediction 49 70 - -
Ssu6g1289 684 MobiDBLite consensus disorder prediction 636 657 - -
Ssu6g1289 684 Gene3D - 311 477 IPR027417 -
Ssu6g1289 684 MobiDBLite consensus disorder prediction 201 230 - -
Ssu6g1289 684 MobiDBLite consensus disorder prediction 151 273 - -
Ssu6g1289 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 310 483 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1289 K17602 - gmx:100804293 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1289 6 20934759 20943068 Ssu6g1289 6 20934759 20943068 ECH