Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1262 ATGTCAGACAAGAGCATGGTTCccacaagatttatattttgTGTAATGGTCATTGCTATGTTCCTTTTGGTCCCGtctttctttttcctcctcCACTTGAGCAATCATTCACTCATTCCTAGATCAGTGTTGGAGCTTATTCTTGTCAACAACACATCATTTGACTTCAAACCCAGTTTCAAGAGGGAACAAATTACTCCCCCTCCCTTCCCTTCTCAAGGTTCAAAAGTTCAACCACAAAGCTGTCAAGTTTCTAATTCAAGCCAGAAACCAAGTTCTCCAAGACAGCAGAGGAAGATGGCATGTGACCCAACCCGTGCTCTCTTAAGGGTGTTCATGTATGACTTACCTCCCGAGTTTCACTTTGGGTTATTGGGTTGGAAGGGGAGTGTGAATCAAACATGGCCTAATGTGAATAACCCAAAACATATCCCACCATATCCAGGTGGGCTTAATTTACAGCATAGTGTGGAGTACTGGCTCACCCTTGATCTTCTGTCTTCAAACATTGCAAAAGTTTTCCGACCTTGCATTGCCATTAGAGTGCAGAATGCAAGTCAAGCAGATGTGATTTTTGTGCCATTTTTCTCGTCTTTGAGTTACAACAGGCATTCCAAAATCCATGGAAAGGAAAAAGTTAGTGTTAACAAAATGCTGCAAGAGAGATTGGTAAAGTTCCTAATGGGGCGGGAAGAATGGAAACGTTCAGGAGGGAAGGATCATGTGATTGTGGCCCACCATCCTAACAGCATGCTGGATGCAAGAAGAAAGTTGGGTTCTGCCATGCTTGTGCTTGCAGATTTTGGAAGATACCCTTCTGAATTAGCAAATATTACGAAGGATATAATAGCTCCGTATAGTCATTTAGTAAGCACTATACCAAGAACTGAGTCAGGTTCATATGAGGAACGTTCTACACTTCTATATTTCCAGGGGGCAATATACAGGAAAGATGGAGGAGCTATTCGCCAAGAACTATATTACCTCCTCAAGGATGAGAAGGATGTGCATTTTGCATTTGGAAGCATCAGAAGAAATGGAATTAATCAGGCAAGCCAGGGCATGGCCTTGTCCAAATTTTGCCTGAACATTGCTGGAGACACCCCATCCTCTAATCGCCTCTTTGATGCCATTGTGAGCCACTGTGTTCCTGTGATCATTAGTGACGAAATTGAGCTACCATTTGAAGATGTTTTGGACTACTCAGAATTTGGCTTGTTTGTCCATGCCTCGGATGCTgttgaaattaaaatgcactatATTCAGTATTTGAGAACTAACAAGATCACAAATTATCCAGCTATTGGTCAATTCGTACGATTTCTCTACTCTATTAGAAACAATGCTGGCTCAAAGATTTGTTCAGCACTTCAGCTTCAATTTTTCAGCTGA 1392 0.4052 MSDKSMVPTRFIFCVMVIAMFLLVPSFFFLLHLSNHSLIPRSVLELILVNNTSFDFKPSFKREQITPPPFPSQGSKVQPQSCQVSNSSQKPSSPRQQRKMACDPTRALLRVFMYDLPPEFHFGLLGWKGSVNQTWPNVNNPKHIPPYPGGLNLQHSVEYWLTLDLLSSNIAKVFRPCIAIRVQNASQADVIFVPFFSSLSYNRHSKIHGKEKVSVNKMLQERLVKFLMGREEWKRSGGKDHVIVAHHPNSMLDARRKLGSAMLVLADFGRYPSELANITKDIIAPYSHLVSTIPRTESGSYEERSTLLYFQGAIYRKDGGAIRQELYYLLKDEKDVHFAFGSIRRNGINQASQGMALSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFGLFVHASDAVEIKMHYIQYLRTNKITNYPAIGQFVRFLYSIRNNAGSKICSALQLQFFS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1262 463 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 3 425 IPR004263 GO:0006486|GO:0016757
Ssu6g1262 463 MobiDBLite consensus disorder prediction 65 99 - -
Ssu6g1262 463 MobiDBLite consensus disorder prediction 66 99 - -
Ssu6g1262 463 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 3 425 - -
Ssu6g1262 463 Pfam Exostosin family 108 417 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1262 Ssu-Chr6 20459466 20461502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1262 - - gmx:100809635 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1262 6 20459466 20461502 Ssu6g1262 6 20459466 20461502 ECH