Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1260 ATGGCGGAAGCCACTGCATCGGAACCGGAAATCGTCGAGCCCACCACGACGGACGCCACCGCAGACATGGCTGTCGAGAGTTCTGAACCCGCCGGTGTTGGCTCAGCATCGAACGGCGAACCCAACCAGAAGCGGACCAGAGAGGACAACGATGACGGAGAAGATGGCGTTTCGAAGAAGCATAAGGTGGAGGCGGAAGAGGAACATTTGAACGGAGAGGATGAGGAAGAGAAGAAGCCCGTGAAATTGGGTTTCAAAAGCTTCGCCACTTCCGTGGAAATGTTCGATTACTTCTACAATCTACTTCATGCATGGCCCCCTTATGTCAATCTTAACAAGTATGAACATATGATGTTACTGGAGTTGCTTAAGAACGGTCATACAGAGCCTGATGAAAAGATTGGAGGAGGAATCCGTGTTTTTCAAGTCCGCAAGCATCCTATGTGGAAAAGTAGGTGCTTCTTCCTCATCAGGGAGGATGAGTCCGTGGATGATTTTAGCTTCCGTAGATGTGTGGATCATATTCTTCCCCTGCCAGAAGAGATGCAATTGAAACCTGATGCTAACAGGGCATTGGGTGGAGGAAAAAATCGTCATAGAGGAAAGAGTGGTGGTGGGAGAGGTGGGCGTGGCCATGGGAGAAAGGGAGGACATTGA 657 0.5008 MAEATASEPEIVEPTTTDATADMAVESSEPAGVGSASNGEPNQKRTREDNDDGEDGVSKKHKVEAEEEHLNGEDEEEKKPVKLGFKSFATSVEMFDYFYNLLHAWPPYVNLNKYEHMMLLELLKNGHTEPDEKIGGGIRVFQVRKHPMWKSRCFFLIREDESVDDFSFRRCVDHILPLPEEMQLKPDANRALGGGKNRHRGKSGGGRGGRGHGRKGGH 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1260 218 MobiDBLite consensus disorder prediction 42 79 - -
Ssu6g1260 218 MobiDBLite consensus disorder prediction 1 79 - -
Ssu6g1260 218 PANTHER PROTEIN EMBRYO DEFECTIVE 514 15 210 - -
Ssu6g1260 218 MobiDBLite consensus disorder prediction 195 218 - -
Ssu6g1260 218 Gene3D - 76 175 - -
Ssu6g1260 218 MobiDBLite consensus disorder prediction 186 218 - -
Ssu6g1260 218 PANTHER - 15 210 IPR044673 -
Ssu6g1260 218 Pfam Protein of unknown function (DUF3223) 100 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1260 Ssu-Chr6 20452106 20453347 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1260 - - gmx:100305757 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1260 6 20452106 20453347 Ssu6g1260 6 20452106 20453347 ECH