Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1255 ATGGACTTCAATCTTGCATTTGTTATTGTAGTAACCGTTTTTGGAATTGGGCTTGAAGGATGCGATAGCAAGGTTGTGCAGTTCATTTTTGGAGATTCCCTCTCAGATGTTGGAAATAACATGCATCTCTCCAGAAGCCTTGCTCAGGCAAGCTTGCCTTGGTATGGTATAGACATGGGTAACGGGTTACCTAATGGAAGGTTCACTAATGGTCGCACAGTTGCTGACATAATAGGTGACAAAATGGGCCTCCCTAGGCCTCGTGCATTTCTGGACCCATCTGCAAGTGAAGAAGTTATACTAGAAAACGGTGTGAACTATGCTTCTGGTGGTGGCGGCATCTTGAATGAAACTGGAGCCTATTTTATCCAAAGGTTTTCTCTGGACAAACAAATTGAGCTGTTTCAGGGTACACAAAATCTAATTAGAGGCAAAATTGGAAAAAAGGCCGCAGCCAAGTTTTTCCAGGAAGCTCGTTATGTTGTTGCTTTAGGGAGCAATGACTTCATCAACAACTACTTGATGCCTGTTTACAGGGATTCATGGACATACAATGATGAAACCTTCATGGACTACTTAATAGGAACACTGCAAAGACAACTAAagCTACTTCATAGTTTAGGAGCAAGACAACTGGTGGTTTTTGGGTTGGGTCCAATGGGCTGCATTCCCCTTCAAAGGGTGCTTAGTACAACTGGGAATTGTCGAGAAAAAGCAAACAAACTGGCTCTTAGCTTCAACAAAGCTGTAAGCCAGTTAGTAGATGACTTGGTGGAGCATTTTCCTGATTCAAGCTATAGATTTGGAGATGCATATGATGTTGTTAATGATGTGATTAGCAATCCAAATAAGTATGGATTCCAAAACTCAGACTCGCCCTGTTGTTCTTTTTGGAATATTCGACCCGCCCTTACATGTGTACCTGCATCAAGTCTGTGCAAAGATAGAAGTAAATATGTCTTTTGGGATGAGTACCACCCCACAGACAGTGCTAATGAGTTAATTGCAAATGAACTCATCAAGAAATTTGGACTTATAAATTCTGATCAAGGGGGTGCACCTTCACCAGCACCTGCTGTTGCTCCATCTCCAGAAGACTAA 1101 0.4205 MDFNLAFVIVVTVFGIGLEGCDSKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFTNGRTVADIIGDKMGLPRPRAFLDPSASEEVILENGVNYASGGGGILNETGAYFIQRFSLDKQIELFQGTQNLIRGKIGKKAAAKFFQEARYVVALGSNDFINNYLMPVYRDSWTYNDETFMDYLIGTLQRQLKLLHSLGARQLVVFGLGPMGCIPLQRVLSTTGNCREKANKLALSFNKAVSQLVDDLVEHFPDSSYRFGDAYDVVNDVISNPNKYGFQNSDSPCCSFWNIRPALTCVPASSLCKDRSKYVFWDEYHPTDSANELIANELIKKFGLINSDQGGAPSPAPAVAPSPED 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1255 366 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 356 - -
Ssu6g1255 366 SUPERFAMILY SGNH hydrolase 156 342 - -
Ssu6g1255 366 CDD SGNH_plant_lipase_like 28 342 IPR035669 -
Ssu6g1255 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 356 - -
Ssu6g1255 366 Pfam GDSL-like Lipase/Acylhydrolase 28 338 IPR001087 GO:0016788
Ssu6g1255 366 Gene3D SGNH hydrolase 26 343 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1255 Ssu-Chr6 20413931 20415847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1255 28 339 Acyl Lipid Metabolism Gene Families AT4G10950 32.484 8.32e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1255 - - gmx:100776733 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1255 6 20413931 20415847 Ssu6g1255 6 20413931 20415847 ECH