Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1227 ATGGTTTCTGAAGCAAACCAATCCAAGAATGTGTGTGCAATTGGAGTTGGACCATCGAGGCTAGTGGTCGCAAAGGAGCTAAGAAGAGAAGGTCACATGGTGGTTGTATTGGAGCAGAACTATGATATTCGAGGTCAATGGCTATATGACCTAAATGTAGAAGGGGAGGATCCTTTAGGAAGAAACCCTTTGCTAAAGGTGCATAGAAGTATCTACAAATCTTTAAGGCTTATGTCTCCTAGAGAGGTCATGGGGTTCATTGATTTCCCTTTTTTAGTTAAGAAAGGTAGAGATGCAAGGAGGTTTCCAAGCTATAGAGAGCTCTTTCTGTACCTCGAGGACTTTTGTGAATGGTTTTGGTTGAAAGAGATGATAAGGTTCAATACAAAGGTTGTCAGAAACAAAGAGAAGAAGAGTGAGGAGATAGTTGAACAAGTGTTTGATGTAGTGGTTATGGCCACTGGCCATTTCTCTAAGCCTAGATTGCCCTCCATTCAAGATCATCTTCAGCTCGACCTTGACCACAACATCTTCAACTCGCCCTCGGTCACAACATCTTTGGCTTGGCCTAAGTCACAACACCTTCGGCCTAGCCTCGACCACAATATCTTCAGCTTTACCTTGGCCACAACATCTTTGGCCTTGCTGTGGGTTAACTTAACCATGAGCATCCCTATTGGCAGAGATGGCGATGGTGAACAAGGGCTGGTAAAGCTAAGAATGATGGTAGATGGGAGAAGGAAAACGAAGtga 753 0.4382 MVSEANQSKNVCAIGVGPSRLVVAKELRREGHMVVVLEQNYDIRGQWLYDLNVEGEDPLGRNPLLKVHRSIYKSLRLMSPREVMGFIDFPFLVKKGRDARRFPSYRELFLYLEDFCEWFWLKEMIRFNTKVVRNKEKKSEEIVEQVFDVVVMATGHFSKPRLPSIQDHLQLDLDHNIFNSPSVTTSLAWPKSQHLRPSLDHNIFSFTLATTSLALLWVNLTMSIPIGRDGDGEQGLVKLRMMVDGRRKTK 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1227 250 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 4 166 - -
Ssu6g1227 250 SUPERFAMILY FAD/NAD(P)-binding domain 7 167 IPR036188 -
Ssu6g1227 250 Gene3D - 7 183 IPR036188 -
Ssu6g1227 250 PANTHER DIMETHYLANILINE MONOOXYGENASE 4 166 - -
Ssu6g1227 250 Pfam Flavin-binding monooxygenase-like 9 163 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1227 Ssu-Chr6 20036950 20038592 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1227 - - gmx:100817010 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1227 6 20036950 20038592 Ssu6g1227 6 20036950 20038592 ECH